Query= MSMg01no141_l06.b1 MSMg01no141_l06.b1 CHROMAT_FILE:
MSMg01no141_l06.b1 PHD_FILE: MSMg01no141_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:24 2005
(636 letters)
>mm_chr9_94799344_94800379
Length = 1036
Score = 1183 bits (612), Expect = 0.0
Identities = 632/640 (98%), Gaps = 5/640 (0%)
Strand = Plus / Plus
Query: 1 tctcctgatagaaagcacctttaagtctttgttctgagccctgtttctctcttattgttt 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tctcctgatagaaagcaactttaagtctttgttctgagccctgtttctctcttattgttt 257
Query: 61 ctgtttttcacctcccctcttcgttcgatctattttattacttacttgtatgtgtacgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctgtttttcacctcccctcttcgttcgatctattttattacttacttgtatgtgtacgca 317
Query: 121 cactttgtctgtgtggtggatttgggggccagaagacttgtggaaactggttctctcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cactttgtctgtgtggtggatttgggggccagaagacttgtggaaactggttctctcttt 377
Query: 181 caaccatatgagttccagatatcaaactcaggtcattagggtgaaacatctcacccagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caaccatatgagttccagatatcaaactcaggtcattagggtgaaacatctcacccagat 437
Query: 241 ---ttgaaaaaatcattttattatttaatacatataggtattttggatctcc-tggaact 296
||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 438 catttgaaaaaatcattttattatttaatacatataggtattttggat-tccctggaact 496
Query: 297 ggagttacagatggttgtataccatcatatgggtgtaggtcctatggaagagcagccact 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggagttacagatggttgtataccatcatatgggtgtaggtcctatggaagagcagccact 556
Query: 357 cttcttaaccactgagcccttcccacattattacttgtttttaatgtagtatggggattt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cttcttaaccactgagcccttcccacattattacttgtttttaatgtagtatggggattt 616
Query: 417 gaaagcaggcttcttacataggccaggcaagtgctctaccactgaactgtgttccctgtc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gaaagcaggcttcttacataggccaggcaagtgctctaccactgaactgtgttccctgtc 676
Query: 477 tccattactttttaaaaatattgtatggtgaagagagccagggctgtgtgtcttttgttt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tccattactttttaaaaatattgtatggtgaagagagccagggctgtgtgtcttttgttt 736
Query: 537 tgttagcaatgaagttactacctgtctcctgcttgaaggacccatggcacctggcatgca 596
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 737 tgttagcaatgaagttactacctatctcctgcttgaaggacccatggcacctggcatgca 796
Query: 597 tggagagctcttctccatccatcgaacgctgtatgtggtg 636
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 797 tggagagctcttctccatccatcgaacgctgtatatggtg 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_l06.g1 MSMg01no141_l06.g1 CHROMAT_FILE:
MSMg01no141_l06.g1 PHD_FILE: MSMg01no141_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:24 2005
(416 letters)
>mm_chr9_94971520_94972331
Length = 812
Score = 619 bits (320), Expect = 0.0
Identities = 392/422 (92%), Gaps = 16/422 (3%)
Strand = Plus / Minus
Query: 1 gagatacagtctcaaaaagtaaaacaaaccagcaacgtacgcatatgtacccatacaagc 60
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||
Sbjct: 735 gagatacagtctcaaaaagtaaaacaaaacagcaacgtacgcatatgtacatatacgagc 676
Query: 61 aaacacacacacacacacacacacac--acagagagagagagagagagagagagagagag 118
|||||||||||||||||||||||||| ||| ||||||||||||| | |||||| |
Sbjct: 675 aaacacacacacacacacacacacacatacacagagagagagaga-----a-agagaggg 622
Query: 119 agagagagagagaacaatttctgcatgttttcctttccctgaaactcccaatccctaacc 178
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 621 agagagagagagaacaatttttgcatgttttcttttccctgaaactcccaatccctaacc 562
Query: 179 tacttgtgcagacctgtgaggggctgcttccgatggggacttacttatttacagagagtt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tacttgtgcagacctgtgaggggctgcttccgatggggacttacttatttacagagagtt 502
Query: 239 cttttaaaacggtctttgctcatatctcatcacagaaatagcctcagtccaggcacagcg 298
||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 501 cttttaaaacgttctttgctcat----catcacagaagtagcctcagtccaggcacagcg 446
Query: 299 agtcccctccaccaggttggctgtgtattgaaacaagcgttttctttttcccttcccgat 358
|||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 agtccccttcaccagattggctgtgtaaggaaacaagcgttttctttttcccttcccgat 386
Query: 359 cctttctgcggcatccctctctttatcttggctttgctaagtttg-ggg-gggg--gggt 414
||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 385 cctttctgcggcatccctctctttatcttggctttgctaagtttgtgggtggggtggggt 326
Query: 415 gg 416
||
Sbjct: 325 gg 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 812
Length adjustment: 9
Effective length of query: 407
Effective length of database: 803
Effective search space: 326821
Effective search space used: 326821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
