Query= MSMg01no141_m07.b1 MSMg01no141_m07.b1 CHROMAT_FILE:
MSMg01no141_m07.b1 PHD_FILE: MSMg01no141_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:33 2005
(627 letters)
>mm_chr9_47413145_47414171
Length = 1027
Score = 1137 bits (588), Expect = 0.0
Identities = 618/632 (97%), Gaps = 10/632 (1%)
Strand = Plus / Minus
Query: 1 gtgaatttgtctcagagtttggaatgac-ccttaaaagtcatagatgccctgctagtgaa 59
|||||||||||||||||||||||||||| || || |||||||||||| ||||||||||
Sbjct: 827 gtgaatttgtctcagagtttggaatgacgcc-tagaagtcatagatgtgttgctagtgaa 769
Query: 60 ccccatctgtcatagcccgactctgtactatatatagcctttcttcaccaaatcaatatg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ccccatctgtcatagcccgactctgtactatatatagcctttcttcaccaaatcaatatg 709
Query: 120 ttgtgtgttcatgtaatctagtatctggtctagaagccttgcaattgtctgtgagctctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ttgtgtgttcatgtaatctagtatctggtctagaagccttgcaattgtctgtgagctctc 649
Query: 180 aattcttactttcacaactcctcacgttgttataattcttaatatacaactgacagatta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aattcttactttcacaactcctcacgttgttataattcttaatatacaactgacagatta 589
Query: 240 gagacagattattttaaagacttcaatccctggtgtatagctgtgggaggagctagtgcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gagacagattattttaaagacttcaatccctggtgtatagctgtgggaggagctagtgcc 529
Query: 300 ttgcatgtgcat----gtttttacacatgaaatctgcaagggacaaactcgcaaaatgct 355
|||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ttgcatgtgcatgcacg----tacacatgaaatctgcaagggacaaactcgcaaaatgct 473
Query: 356 gcactgacttacaccacaggttcctaccgcaaaggatctcacaggaacacacctcagacc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gcactgacttacaccacaggttcctaccgcaaaggatctcacaggaacacacctcagacc 413
Query: 416 agaccgtttctaaacctccttgtctacgtcaccaagtatccagtaagcccagctctcgac 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agaccgtttctaaacctccttgtctacgtcaccaagtatccagtaagcccagctctcgac 353
Query: 476 agtgtctaagtcacccagatgcctcagtccaaagtctctcataaaaccatgggaggacag 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agtgtctaagtcacccagatgcctcagtccaaagtctctcataaaaccatgggaggacag 293
Query: 536 tgactgcgatcatgtgccactgtgcatacttgtaaggactgataattctagctaccttta 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tgactgcgatcatgtgccactgtgcatacttgtaaggactgataattctagctaccttta 233
Query: 596 ttcccaccctgtccaagaatcaaaccagaatt 627
||||||||||||||||||||||||||||||||
Sbjct: 232 ttcccaccctgtccaagaatcaaaccagaatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_m07.g1 MSMg01no141_m07.g1 CHROMAT_FILE:
MSMg01no141_m07.g1 PHD_FILE: MSMg01no141_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:33 2005
(590 letters)
>mm_chr9_47287460_47288448
Length = 989
Score = 1071 bits (554), Expect = 0.0
Identities = 581/590 (98%), Gaps = 1/590 (0%)
Strand = Plus / Plus
Query: 1 tgacagagtctccaaccaactaaaatagtcatctttcaaggttaacaaggagctacttag 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacagagtctccaacgaactaaaatagtcatctttcaaggttaacaaggagctacttag 260
Query: 61 aagccccagcatgactgtcaatagccaatcaaggggagctgtcagccgctccccctgagg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 261 aagccccagcatgactgtcaatagccaatcaagggaagctgtcagccgctccccc-gagg 319
Query: 121 aagggcttcagctaaaccaatgagaagcgccggggtggctgcatctggagaagaaccagc 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 320 aagggcttcagctaaaccaatgagaagcgccggggtgtctgcatctggagaagaaccggc 379
Query: 181 tgcttggcttctgtgttggaacccagagccgaaggtgagcgaggtggggtggtgccattc 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttcttggcttctgtgttggaacccagagccgaaggtgagcgaggtggggtggtgccattc 439
Query: 241 tctgaagcagaaccagaccagaatggtcccagtgggatgcctgcaaccagttaaaacctg 300
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 440 tctgaagcagaaccagaccagaatggtcccagtgggatgcctgcaaccagggaaaacctg 499
Query: 301 ctgcaatctggggctcattccatgaaatccattgtcctctccccatgagaggggttctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgcaatctggggctcattccatgaaatccattgtcctctccccatgagaggggttctca 559
Query: 361 attaaatttctcccgaggtccttttactcccctagtgatctgtttcatgcaggatttctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 attaaatttctcccgaggtccttttactcccctagtgatctgtttcatgcaggatttctt 619
Query: 421 tctcctctcagatactgcaaggtggagttaaatgaatattctaattctagtttgggattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tctcctctcagatactgcaaggtggagttaaatgaatattctaattctagtttgggattg 679
Query: 481 gatttaaccccaccagctactgccagggacttttgtaatggagagcaattgagatatatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gatttaaccccaccagctactgccagggacttttgtaatggagagcaattgagatatatt 739
Query: 541 ggttactttctcatggctgagtccaaataggtgacaagagacaagtgggc 590
|||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 740 ggttactttctcatggctgagtccaaatagctgacaagagacaagtgggc 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 989
Length adjustment: 10
Effective length of query: 580
Effective length of database: 979
Effective search space: 567820
Effective search space used: 567820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
