Query= MSMg01no144_g23.b1 MSMg01no144_g23.b1 CHROMAT_FILE:
MSMg01no144_g23.b1 PHD_FILE: MSMg01no144_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:16 2005
(706 letters)
>mm_chr9_65680444_65681549
Length = 1106
Score = 1106 bits (572), Expect = 0.0
Identities = 578/580 (99%)
Strand = Plus / Minus
Query: 4 ggaattctttatgaagtggcttacagatctttgaatatgttatttataaaaaaatcattt 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ggaattctttatgaagtgggttacagatctttgaatatgttatttataaaaaaatcattt 521
Query: 64 taaaaattctaggtcatttttctcagaactaaattcaaaacaggaaggaacaaattggaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 taaaaattctaggtcatttttctcagaactaaattcaaaacaggaaggaacaaattggaa 461
Query: 124 attattttcctcagtgagatttgtattttgaattaggaaaatctcaacatagattaacat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 attattttcctcagtgagatttgtattttgaattaggaaaatctcaacatagattaacat 401
Query: 184 ttttacaagagactctgaatttaattttttttctcaaaataatagaatggagactactag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ttttacaagagactctgaatttaattttttttctcaaaataatagaatggagactactag 341
Query: 244 gatgtctgaggaatctttgtttaacataagcctatggtgaaatgagaatgttcttaccaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gatgtctgaggaatctttgtttaacataagcctatggtgaaatgagaatgttcttaccaa 281
Query: 304 gtgttctgcttttgacatcttgagaccaggccacattctgtgacccaggcttgcctggaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gtgttctgcttttgacatcttgagaccaggccacattctgtgacccaggcttgcctggaa 221
Query: 364 ctcacaacaaccctcctgccgaagcctctcaagtgctgtgtttacaggccagtagcccca 423
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ctcacaacaatcctcctgccgaagcctctcaagtgctgtgtttacaggccagtagcccca 161
Query: 424 tgctcagcttctaacccaaatctctcagagtggaaagctagaattcccagtatcagcaga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tgctcagcttctaacccaaatctctcagagtggaaagctagaattcccagtatcagcaga 101
Query: 484 tttttttttctttctttttggaaaaggtaacatgaagacatacttccttttgttctttag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tttttttttctttctttttggaaaaggtaacatgaagacatacttccttttgttctttag 41
Query: 544 tttgagaacatgggttagtctgggaagtgagggagctacc 583
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 tttgagaacatgggttagtctgggaagtgagggagctacc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1106
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1096
Effective search space: 762816
Effective search space used: 762816
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no144_g23.g1 MSMg01no144_g23.g1 CHROMAT_FILE:
MSMg01no144_g23.g1 PHD_FILE: MSMg01no144_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:16 2005
(663 letters)
>mm_chr9_65577240_65578302
Length = 1063
Score = 1253 bits (648), Expect = 0.0
Identities = 660/664 (99%), Gaps = 1/664 (0%)
Strand = Plus / Plus
Query: 1 tttgcactcaaagtaactagatgttaccgaaggacctgactgaagcggctaagtgccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgcactcaaagtaactagatgttaccgaaggacctgactgaagcggctaagtgccttt 260
Query: 61 gcgccccattcttttctgttcatgtttttgttcagaaattccaacagaagagtttctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgccccattcttttctgttcatgtttttgttcagaaattccaacagaagagtttctgtt 320
Query: 121 ctccagggcaaatggagcatataaaaagtctgcatggcagctaatagcaagccaggtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctccagggcaaatggagcatataaaaagtctgcatggcagctaatagcaagccaggtgaa 380
Query: 181 agccccaaatttctctactgacaaggcccataaagactgtatgtactcagagacagacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccccaaatttctctactgacaaggcccataaagactgtatgtactcagagacagacac 440
Query: 241 atcaaatgtgtaggtagttggacaatgaggtgaccagtgagaagaaggagttgcctgtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcaaatgtgtaggtagttggacaatgaggtgaccagtgagaagaaggagttgcctgtat 500
Query: 301 acctggaaatacttaaaattcactgtgccaacattaagtcaatttaacagtgggaggtgt 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 acctggaaatacttaaaattcactgtgccaacattaagtcaatttaagagtgggaggtgt 560
Query: 361 ggtagtacacttctgcaatcccagtaattgagaggtagaagcaggaggaaccagaattta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtagtacacttctgcaatcccagtaattgagaggtagaagcaggaggaaccagaattta 620
Query: 421 aagccatcattagctacatattaactttgaggttaccacgggctacatgagaccatgttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagccatcattagctacatattaactttgaggttaccacgggctacatgagaccatgttt 680
Query: 481 ttgtttttttgtttttttaaaatcaagaccaacgcctctacctccatgtctgcatggcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgtttttttgtttttttaaaatcaagaccaacgcctctacctccatgtctgcatggcag 740
Query: 541 tttccctggacctgttctccacggccggtgaaactgcccagccaagagctctccccaatc 600
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttccctggacctgttctccaaggccggtgaaactgcccagccaagagctctccccaatc 800
Query: 601 aatctgcctttgtaacaaacacagag-atggagagatggttcaagcagcagcaagtacta 659
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 801 aatctgcctttgtaacaaacacagaggatggagagatggctcaagcagcagcaagtacta 860
Query: 660 gctg 663
||||
Sbjct: 861 gctg 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
