Query= MSMg01no145_e14.b1 MSMg01no145_e14.b1 CHROMAT_FILE:
MSMg01no145_e14.b1 PHD_FILE: MSMg01no145_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:20 2005
(370 letters)
>mm_chr9_26476166_26476935
Length = 770
Score = 545 bits (282), Expect = e-159
Identities = 352/386 (91%), Gaps = 20/386 (5%)
Strand = Plus / Plus
Query: 4 gaattcaagaaggtaccggagagtgggaagacatatggagtgagtaacagggttgaggcc 63
||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 186 gaattcaagaagggagaggagagtgggaagacatatggaatgagtaacagggttgaggcc 245
Query: 64 tggcatagtgcagaggatggaggaattgccacatta--ctgtttctgtatatccatagaa 121
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 246 tggcatagtgcagaggatggaggaattgccacattactctgtttctgtatatccatagca 305
Query: 122 atca----------------tttatctctagtgatgaagagaaacaagcctcagggaaag 165
|||| ||||||||||||||||||| ||| |||| ||||||||| |
Sbjct: 306 atcatttgaagatggaatagtttatctctagtgatgaagtgaaccaagtctcagggaagg 365
Query: 166 gactaaagattcaagatg-tactatcagacctaggctcatgttgtttcaaatgccaaggt 224
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gactaaagattcaagatgct-ctatcagacctaggctcatgttgtttcaaatgccaaggt 424
Query: 225 gtcccctctcccctccttcccctacagccttcattctcctcgactctgatactcatgctg 284
|||||||||||||||||||||||||||||||||||||||| | ||||||||| || ||||
Sbjct: 425 gtcccctctcccctccttcccctacagccttcattctccttggctctgatacccaggctg 484
Query: 285 aggcaataccacacatccaatgcagaatatgacttcatgattaaggattaaggagctaac 344
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 485 aggcaataccacacatccaatgcagtatatgacttcatgattaaggattaaggagctaac 544
Query: 345 tggatagccattatagacatcaagat 370
||||||||||||||||||||||||||
Sbjct: 545 tggatagccattatagacatcaagat 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_e14.g1 MSMg01no145_e14.g1 CHROMAT_FILE:
MSMg01no145_e14.g1 PHD_FILE: MSMg01no145_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:20 2005
(465 letters)
>mm_chr9_26606645_26607509
Length = 865
Score = 845 bits (437), Expect = 0.0
Identities = 458/465 (98%), Gaps = 1/465 (0%)
Strand = Plus / Minus
Query: 1 tccagaatttggaatttgataacagttagtcatttgcttgtttgtttacttctatttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tccagaatttggaatttgataacagttagtcatttgcttgtttgtttacttctatttctt 455
Query: 61 gaacagcattgtgaaattttgttttaagtccaaaaaatgataggctataaaaggacagag 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 454 gaacagcattgtgaaattttgttttaagttcaaaaaatgataggctataaaaggacagag 395
Query: 121 aaagaaaaagaaagaggtgttgagaatgactcgttcagatttgttagtgggtgagagaag 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aaagaaaaagaaagaggagttgagaatgactcgttcagatttgttagtgggtgagagaag 335
Query: 181 aggagaaaaagatatatgagggcaggaagcgggacccttatctgcttgctatatattgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aggagaaaaagatatatgagggcaggaagcgggacccttatctgcttgctatatattgca 275
Query: 241 ataaagatattaagtcatataatggctcatgggagtttgaagttaaaaagtttgaaatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ataaagatattaagtcatataatggctcatgggagtttgaagttaaaaagtttgaaatga 215
Query: 301 agctgtatattttctatgtgtggttttgtttttcatctcaaaacactctctgatttcttt 360
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 214 agctgtatattttctatgtgtggttttgtttttcatctcaaaacattttctgatttcttt 155
Query: 361 gtgatttttttttcctcgactcctttgttggttaggagtgctgttcaatttctacctgtt 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gtgatttttttt-cctcgactcctttgttggttaggagtgctgttcaatttctacctgtt 96
Query: 421 tgagaactttctagttttacttctcttagtgattccttttttgat 465
|||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 95 tgagaactttctagttttacttctcttactgattccttgtttgat 51
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
