Query= MSMg01no145_l24.b1 MSMg01no145_l24.b1 CHROMAT_FILE:
MSMg01no145_l24.b1 PHD_FILE: MSMg01no145_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:56 2005
(532 letters)
>mm_chr9_66873749_66874680
Length = 932
Score = 969 bits (501), Expect = 0.0
Identities = 522/529 (98%)
Strand = Plus / Plus
Query: 1 ctcaacccactttgggccttgttccttctagctgcagggtagccagtgactggggtgacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcaacccactttgggccttgttccttctagctgcagggtagccagtgactggggtgacc 260
Query: 61 cgagggcaggcacatttctaagtgttcaccctcctgttctgcacagaccccagctgtctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgagggcaggcacatttctaagtgttcaccctcctgttctgcacagaccccagctgtctt 320
Query: 121 gaggtctctggtctcacagctggcagcgatgtttgtctgggccaactgaggctcttggga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 gaggtctctggtctcacagctggcagcgatgtttgtctgggccaactgaggctcttggaa 380
Query: 181 gagtcacggatacaggctggcctgtggcctgttaaacagactcctgataacctcaacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtcacggatacaggctggcctgtggcctgttaaacagactcctgataacctcaacttg 440
Query: 241 ctgcgtacacaccttaagctacatgggatctgcttttatgacccgctcgatcccatttct 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgcgtgcacaccttaagctacatgggatctgcttttatgacccgctcgatcccatttct 500
Query: 301 ccctcagtgaacactcatagaaagtctgagaagatctctggcccagccaagaaatttgta 360
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 cccgcagtgaacactcatagaaagtctgagaagatctctgggggagccaagaaatttgta 560
Query: 361 cctcaagatgaaggaacgacagacagcttggcacaactccgagcgtcttgcttccactgt 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 cctcaagatgaaggaacgacagacagctcggcacaactccgagcgtcttgcttccactgt 620
Query: 421 gacagatcactcagaaagagcacagctcttagtctgaattttaaaaagaaccaggttcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacagatcactcagaaagagcacagctcttagtctgaattttaaaaagaaccaggttcct 680
Query: 481 aaatcatggtgagaagcaggcccatggagcattagggaaagggaaagaa 529
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatcatggtgagaagcaggcccatggagcattagggaaagggaaagaa 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_l24.g1 MSMg01no145_l24.g1 CHROMAT_FILE:
MSMg01no145_l24.g1 PHD_FILE: MSMg01no145_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:56 2005
(421 letters)
>mm_chr9_66951359_66952179
Length = 821
Score = 627 bits (324), Expect = 0.0
Identities = 364/382 (95%), Gaps = 8/382 (2%)
Strand = Plus / Minus
Query: 1 tttcctcatcaaggttttcagaagtctcttgagataaagctacttcattggcttagtgtt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 382 tttcctcatcaaggttttcagaagtctcttgggataaagctacttcattggcttagtatt 323
Query: 61 tgctttggctggtgaggctgcaggtatgatcctcagcactgaagagggaaaaaagcctgg 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgctttgactggtgaggctgcaggtatgatcctcagcactgaagagggaaaaaagcctgg 263
Query: 121 gagagaaagtagggtcattcgattgcccagagatagacatggcag--------ttagcag 172
||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 262 gagagaaagtagggtcattcgattgcccagagatagacaaggcagttagcagcttagcag 203
Query: 173 ctaagcagcttgtccatctcaggtctgcctgccgctgcagcccacgccctcagcacagcc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctaagcagcttgtccatctcaggtctgcctgccgctgcagcccacgccctcagcacagcc 143
Query: 233 cctgcttcttggctccaggcaggtgacaggttacttctctgatgatgaaatgaagcaatt 292
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 142 cctgcttcttggctccaggcaggtgacaggttacttctctgctggtgaaatgaagcaatt 83
Query: 293 taaaccagattagaatatattggaggcaagtttgggagagttcactggccctaagaattg 352
|||||||||||||||||| || |||||| ||||||||||||||||||| |||||||||||
Sbjct: 82 taaaccagattagaatattttagaggcaggtttgggagagttcactgggcctaagaattg 23
Query: 353 aggccaggggagtcaccatggg 374
||||||||||||||||||||||
Sbjct: 22 aggccaggggagtcaccatggg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
