Query= MSMg01no146_h08.b1 MSMg01no146_h08.b1 CHROMAT_FILE:
MSMg01no146_h08.b1 PHD_FILE: MSMg01no146_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:15 2005
(641 letters)
>mm_chr9_52466147_52467182
Length = 1036
Score = 1093 bits (565), Expect = 0.0
Identities = 621/641 (96%), Gaps = 5/641 (0%)
Strand = Plus / Minus
Query: 1 ataagaaatccagaaggcatctagcagcttctgttattaagcaggcgcagggcgttaggg 60
||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 836 ataagaaatccagaaagcatctagcagggtctgttattaagcaggggcagggcgttaggg 777
Query: 61 tttttgggagtggaagaggtcaggctctgcttccagagttgaggtaactctttgtctctt 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tttttgggagtggaaggggtcaggctctgcttccagagttgaggtaactctttgtctctt 717
Query: 121 tataggaggtcctgggtccagagctttgtgtgggataacacagtgggacagaatcaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tataggaggtcctgggtccagagctttgtgtgggataacacagtgggacagaatcaatgc 657
Query: 181 actgcaccacttacctgccatggcctggctgggccttggttcccttacactcagtttaag 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 actgcaccacttacttgccatggcctggctgggccttggttcccttacactcagtttaag 597
Query: 241 tggactctccgttgccaggcttgcatctcccatggctcgaactaaaaactgacacttata 300
||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 596 tgggctctccgtagccaggcttgcatctcccatggctcgg-ctaaaaactgacacttata 538
Query: 301 ccaattccacaactcttggaaacttagcttctgtttcttccttagctgagaaaaatacag 360
|| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ccgattccacaacacagggaaacttagcttctgtttcttccttagctgagaaaaatacag 478
Query: 361 caacttcctgggcttctaaaagtcacctggctagaaatttgttcattgcactgcattata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 caacttcctgggcttctaaaagtcacctggctagaaatttgttcattgcactgcattata 418
Query: 421 tgaaagtatgaaattcccaaccaatcaaactacattttagaaaattttttttgttgttgt 480
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 417 tgaaagtatgaaattcccaaccaatcaaactacattttagaac-ttttttttgttgttgt 359
Query: 481 tgttttttgttttggtaaatacactttctgaccttttattacattttctaaacacctagc 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgttt---gttttggtaaatacactttctgaccttttattacattttctaaacacctagc 302
Query: 541 actaatgaaaagcttatataatgacaaccgttccttaatccttcattacctgcttcattc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 actaatgaaaagcttatataatgacaaccgttccttaatccttcattacctgcttcattc 242
Query: 601 acggttctgagtatgatctgacatctagaaattatggaagt 641
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 acggtactgagtatgatctgacatctagaaattatggaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1036
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1026
Effective search space: 647406
Effective search space used: 647406
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no146_h08.g1 MSMg01no146_h08.g1 CHROMAT_FILE:
MSMg01no146_h08.g1 PHD_FILE: MSMg01no146_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:15 2005
(596 letters)
>mm_chr9_52355009_52356004
Length = 996
Score = 1116 bits (577), Expect = 0.0
Identities = 592/597 (99%), Gaps = 2/597 (0%)
Strand = Plus / Plus
Query: 1 ggactattaagcatccaagctttcattctctaa-tgagattgaggttaaaaaatggcaca 59
||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 201 ggactattaagcatccaagctttcatt-tcaaaatgagattgaggttaaaaaatggcaca 259
Query: 60 aagacttgtgccaaatcttagtggggaaattggtagggctgagggtactctcaaagtctt 119
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 260 aagacttgtgccaaatcttagtggggaaattggtagggctgaggatactctcaaagtctt 319
Query: 120 ttaaaaagatttaatgtttatttttaattatgtgtatctcagtgtataattgtgtacctg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttaaaaagatttaatgtttatttttaattatgtgtatctcagtgtataattgtgtacctg 379
Query: 180 aatgaagatgcccctggaatcctcttggatctggagttacatggggctaggaattgcttg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aatgaagatgcccctggaatcctcttggatctggagttacatggggctaggaattgcttg 439
Query: 240 aatgggtactgagaaccaagcttgggtgcactcagaactgctgagctatctctgaagtcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatgggtactgagaaccaagcttgggtgcactcagaactgctgagctatctctgaagtcc 499
Query: 300 tgggaaacagtctctatgtcatgaaagcttaacctcattttgttaaaatgttttcagagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgggaaacagtctctatgtcatgaaagcttaacctcattttgttaaaatgttttcagagt 559
Query: 360 taagactcacattcaactcagtgtctaagaaaatattatatgcttatgaaatattattat 419
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 taagactcactttcaactcagtgtctaagaaaatattatatgcttatgaaatattattat 619
Query: 420 taactttgttgattgatatgaacaatccaggatagaaattaacaaataaatttaattgtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 taactttgttgattgatatgaacaatccaggatagaaattaacaaataaatttaattgtt 679
Query: 480 gcagtaatgaagatatgaagattacacagcaaatagatggcagcattgggatttggcctc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gcagtaatgaagatatgaagattacacagcaaatagatggcagcattgggatttggcctc 739
Query: 540 ttgactgcttctgagacccatatattggtatttataccataatacatctctaaagcc 596
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttgactgcttctgagacccatatattggtatttataccataatacatctctaaagcc 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
