Query= MSMg01no148_b09.b1 MSMg01no148_b09.b1 CHROMAT_FILE:
MSMg01no148_b09.b1 PHD_FILE: MSMg01no148_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:52 2005
(666 letters)
>mm_chr9_51069384_51070449
Length = 1066
Score = 1216 bits (629), Expect = 0.0
Identities = 654/663 (98%), Gaps = 2/663 (0%)
Strand = Plus / Plus
Query: 4 gaattccactccagaatactgacctttctcagggaaggaaaggctagactatggactcct 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccactccagaagagtgacctttctcagggaaggaaaggctagactatggactcct 265
Query: 64 ataggtttatgttggcatcttggtcatgtaatttattgacttgggcctttgattctctct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ataggtttatgttggcatcttggtcatgtaatttattgacttgggcctttgattctctct 325
Query: 124 gaatctggtttctcatctggaaatgagataacaacacctgccttattgcttgtgttccag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaatctggtttctcatctggaaatgagataacaacacctgccttattgcttgtgttccag 385
Query: 184 tttactttctgctgctgtgataaagaccatgatcagaagggacttggggaggaagttcac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tttactttctgctgctgtgataaagaccatgatcagaagggacttggggaggaagttcac 445
Query: 244 tttgcagactgcaatctatcaagtcagggtaggagcacaaggcaggaacctagaggcagg 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 446 tttgcagactgcaatctatcaagtcagggtaggagcacaagacaggaacctagaggcagg 505
Query: 304 aactgaagcagagatcacagagggacacttttccctagcttgctaattatggctcactca 363
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 506 aactgaagcagagatcacagagggacacttttccctagcttgctaatcatggctcgct-- 563
Query: 364 gtttgctttcttatacaacccaggaccacctgctcagggaaggcagtgtactgggctctc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtttgctttcttatacaacccaggaccacctgctcagggaaggcagtgtactgggctctc 623
Query: 424 tcacacccccatcacttgcctatctgatgaaggcattctctcagttgaagtctcctcttt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tcacacccccatcacttgcctatctgatgaaggcattctctcagttgaagtctcctcttt 683
Query: 484 ccagatgatcagagcctgtgtcaagttgacaaaaaactaaccagcacagctggatatagg 543
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccagatgatcagagtctgtgtcaggttgacaaaaaactaaccagcacagctggatatagg 743
Query: 544 gaagaaatgaaatgaaggctggttgcagtctaagaggaactggtacagcagacaaaacag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaagaaatgaaatgaaggctggttgcagtctaagaggaactggtacagcagacaaaacag 803
Query: 604 gtgggggcggggtggggcatatcagcagaggggaatggctgaagtaacaaagacttttct 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gtgggggcggggtggggcatatcagcagaggggaatggctgaagtaacaaagacttttct 863
Query: 664 tag 666
|||
Sbjct: 864 tag 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_b09.g1 MSMg01no148_b09.g1 CHROMAT_FILE:
MSMg01no148_b09.g1 PHD_FILE: MSMg01no148_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:52 2005
(645 letters)
>mm_chr9_51211593_51212640
Length = 1048
Score = 1139 bits (589), Expect = 0.0
Identities = 633/649 (97%), Gaps = 5/649 (0%)
Strand = Plus / Minus
Query: 1 ctgcctaagcagtgctatcagagaaggtctcaccaaaaagttggaaaagttcacagattt 60
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ctgcttaagcagtactatcagagaaggtctcaccaaaaagttggaaaagttcacagattt 590
Query: 61 atatgtttgataaatgctagctactaatactgtccaaagaaattttagcttctggcaata 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 atatgtttgataaatactagctactaatactgtccaaagaaattttagcttctggcaata 530
Query: 121 atatcttca-tcatggccacc---atgagacaaatctgagagttactacctggacactgg 176
||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 529 atatcttcact-atggccaccataatgagacaaatctgagagttactacctggacactgg 471
Query: 177 ctctggccagcacttcttgtactcagttgttctaagaaagagaccctgagccctatctta 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 470 ctctggccagcacttcttgtactcagttgttctaagaaagagaccctgagccctatttta 411
Query: 237 gagaactgggtcacctttggtgaaatggactcagcccacatactcatgttttctgagtat 296
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 410 gagaactgggtcacctttggtgaaatggactcggcccacatactcatgttttctgagtat 351
Query: 297 agttagcagtctcagcttaactagattgttgatattcaatatgggctcttctgttgagaa 356
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 350 agttagcagtctcaacttaactagattgctgatattcaatatgggctcttctgttgagaa 291
Query: 357 gagcttaggaataagtcaatgcagggatggatagccatttccctgggggtcatctgcaat 416
|||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 290 gagcttagaaataagtcaattcagggatggatagccatttccctggggatcatctgcaat 231
Query: 417 ctgcaatcagatgcccttggtttgaggcaatataggtgagaataggccagaatacattga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ctgcaatcagatgcccttggtttgaggcaatataggtgagaataggccagaatacattga 171
Query: 477 gacaaaacattaactggaatcccaggagcttaacacaactgaagtttatttcttattcat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gacaaaacattaactggaatcccaggagcttaacacaactgaagtttatttcttattcat 111
Query: 537 ctaacatccattctgggtctgagtgacccttgaagacagctctaatcgcacaagaccact 596
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 110 ctaacatccattctgggtctgagtgacccttgaagacagctctaatcccacaagaccact 51
Query: 597 aaaatcttatgactccatcaagtcgtaagtctacccaaggctttttcct 645
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 aaaatcttatgactccatcaagtcgtaagtctacccaaggctttttcct 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1048
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1038
Effective search space: 659130
Effective search space used: 659130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
