Query= MSMg01no148_l22.b1 MSMg01no148_l22.b1 CHROMAT_FILE:
MSMg01no148_l22.b1 PHD_FILE: MSMg01no148_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:45 2005
(371 letters)
>mm_chr9_86523395_86524165
Length = 771
Score = 698 bits (361), Expect = 0.0
Identities = 367/369 (99%)
Strand = Plus / Minus
Query: 3 gaattctgaagggagattcctctcatcagggcccgttccttctctagatttcattttgta 62
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gaattctgaagggagactcttctcatcagggcccgttccttctctagatttcattttgta 512
Query: 63 ttaacattaaaaagtcttttgccagacttttgtgtggcctctctagttagatgtctctgg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttaacattaaaaagtcttttgccagacttttgtgtggcctctctagttagatgtctctgg 452
Query: 123 ctacactttttctctcttagcctaactacagcatatattcttctgtaatgaaaccgtttg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ctacactttttctctcttagcctaactacagcatatattcttctgtaatgaaaccgtttg 392
Query: 183 gcttttgtgatacgtgagtgcagtttggtggttttcctcagtagcaggcagttgtgatgg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gcttttgtgatacgtgagtgcagtttggtggttttcctcagtagcaggcagttgtgatgg 332
Query: 243 actctcccaggttccattgcctttattttaaactactgaacaatttagaactctagctct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 actctcccaggttccattgcctttattttaaactactgaacaatttagaactctagctct 272
Query: 303 attttaagagttgcatgggtggggtcttttcaactctttgggccttgaaaggctctttct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 attttaagagttgcatgggtggggtcttttcaactctttgggccttgaaaggctctttct 212
Query: 363 aaataagaa 371
|||||||||
Sbjct: 211 aaataagaa 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_l22.g1 MSMg01no148_l22.g1 CHROMAT_FILE:
MSMg01no148_l22.g1 PHD_FILE: MSMg01no148_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:45 2005
(347 letters)
>mm_chr9_86419630_86420377
Length = 748
Score = 650 bits (336), Expect = 0.0
Identities = 345/348 (99%), Gaps = 1/348 (0%)
Strand = Plus / Plus
Query: 1 gagggagggaaaacataaaatagcaaaagtagtgctctaccatctttgaaaac-atagaa 59
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 gagggagggaaaacataaaatagcaaaagtagtgctctaccatctttgaaaacaatagaa 260
Query: 60 aggagttggcagaatggagctggctcctttacgatacccttgcatgttgttttttcccta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggagttggcagaatggagctggctcctttacgatacccttgcatgttgttttttcccta 320
Query: 120 taagatttgttgtgtttgactttgatttatcttatttatttgtgcgtgcatgtccatacg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagatttgttgtgtttgactttgatttatcttatttatttgtgcgtgcatgtccatacg 380
Query: 180 ccgtgacgcacaagcacatggtcagaggacaacctagaggagttgtttcactcttcacac 239
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 ccgtgacgcacaagcacatggtcaaaggacaacctagaggagttgtttcactcttcacac 440
Query: 240 cattgttggtcctgtggatggaactcaagtgctgagccttgatggcaaatacattacaca 299
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattgttggtcctggggatggaactcaagtgctgagccttgatggcaaatacattacaca 500
Query: 300 cggagccatcgggccagccctgattttgatttttatgaagtgagattc 347
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cggagccatcgggccagccctgattttgatttttatgaagtgagattc 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 748
Length adjustment: 9
Effective length of query: 338
Effective length of database: 739
Effective search space: 249782
Effective search space used: 249782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
