Query= MSMg01no148_p05.b1 MSMg01no148_p05.b1 CHROMAT_FILE:
MSMg01no148_p05.b1 PHD_FILE: MSMg01no148_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:01 2005
(673 letters)
>mm_chr9_33532618_33533690
Length = 1073
Score = 971 bits (502), Expect = 0.0
Identities = 520/526 (98%), Gaps = 1/526 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcttccttccctctccagttggacctccctttggctgaactcactttaaccct 64
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcttccttccatctccagttggacctccctttggctgaactcactttaacccg 264
Query: 65 gtaggatacatgaacttattaaagatttgcttctaggtcagtgtcctggggcagagacca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtaggatacatgaacttattaaagatttgcttctaggtcagtgtcctggggcagagacca 324
Query: 125 aggtgaggacaggtgcacagcatatggaatgcatctggtacaagcaatctactgcctttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggtgaggacaggtgcacagcatatggaatgcatctggtacaagcaatctactgcctttc 384
Query: 185 tgtttctaccccagaagtagcttccactttttctccttgcattggggttaatattcaatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtttctaccccagaagtagcttccactttttctccttgcattggggttaatattcaatt 444
Query: 245 taatttccttagaatattatctatggagttttcctccacgattaagccaagtattcattt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taatttccttagaatattatctatggagttttcctccacgattaagccaagtattcattt 504
Query: 305 ccacataaaaaaaaccctcctggtttagttaataaattgtgtatgtaccctactttagcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccacataaaaaaaaccctcctggtttagttaataaattgtgtatgtaccctactttagcc 564
Query: 365 taattatttacattttggaatctacattattagatatagggtcaccctttaaagatagtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taattatttacattttggaatctacattattagatatagggtcaccctttaaagatagtg 624
Query: 425 attagtctctctatatagtatatgtgcctaaaaatccatgagagctgcctgcatggctca 484
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 625 attagtctctctatatagtatatgtgcctaaaaatccatgagagctgcctgtatggctca 684
Query: 485 cagaatgtaagaataccctcatttcagtcaccaagcctgacatttt 530
||||| || |||||||||||||||||||||||||||||||| ||||
Sbjct: 685 cagaacgtgagaataccctcatttcagtcaccaagcctgac-tttt 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_p05.g1 MSMg01no148_p05.g1 CHROMAT_FILE:
MSMg01no148_p05.g1 PHD_FILE: MSMg01no148_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:01 2005
(643 letters)
>mm_chr9_33620558_33621600
Length = 1043
Score = 1172 bits (606), Expect = 0.0
Identities = 633/642 (98%)
Strand = Plus / Minus
Query: 1 ccatgatgtatttattagcctacttgataacacccaccgacactgaggttaccttcggat 60
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 842 ccatgatgtatttattagcctactcgataacacccacagacactgaggttaccttcggat 783
Query: 61 tttttactgctcctttctcccagataaactgacagaatcatttcaagtgaccagtctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tttttactgctcctttctcccagataaactgacagaatcatttcaagtgaccagtctctg 723
Query: 121 aacaaatggattgtttcctctctgaccaacagtgctgtttgacctccttctagctcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aacaaatggattgtttcctctctgaccaacagtgctgtttgacctccttctagctcttcc 663
Query: 181 atttaatgcatattcttgtagtaagactttcattaatgtgtggacatcattgcagtaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 atttaatgcatattcttgtagtaagactttcattaatgtgtggacatcattgcagtaaga 603
Query: 241 ctttcctgactcccgttaagattttctcctgactgaagctctcacctgaggaagacattg 300
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ctttcctggctccccttaagattttctcctgactgaagctctcacctgaggaagacattg 543
Query: 301 gctccctgtgctcattccacattttcatccagggtattttgaaaaatctcagcaagtaat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 542 gctccctgtgctcattccacattttcatccagggtattttgaaaaatctcagcaggtaat 483
Query: 361 taaaacaccttcatgtcacctgcattgattttggggtgtcctctctgctgtgtttgagtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 taaaacaccttcatgtcacctgcattgattttggggtgtcctctctgctgtgtttgagtc 423
Query: 421 ctgtttctcttcttttccttgattctgtatttatatttatttatctggaaaaataagaat 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 422 ctgtttctcttcttttccttgattctgtatttatatttatttatctggaaaaataagatt 363
Query: 481 aaggcatcttctattgttcacaagttaatatggcatgagagaccctaactcatatgccac 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaggcgtcttctattgttcacaagttaatatggcatgagagaccctaactcatatgccac 303
Query: 541 caaaagcttgtgagagccatttgatggtccatgctagcttggaccttgtgcaaccccaga 600
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 302 caaaagcttgtgagagccatttgatggtccatgctagcttgaaccttgtgcgaccccaga 243
Query: 601 gcactgggggccatctttactctgaggtaaaacaaaagtcag 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcactgggggccatctttactctgaggtaaaacaaaagtcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
