TGGACATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAAGAGGATC
CGCGGAATTCATTTCTTTCCACATCTGCTGTGATTTATCTATTTTATCCT
TCCTCATCCAGCACCTCTCCATCTCATCAGAGCATTCTCTCCACTCTCAT
TTTTATTTTTTAAATTTTATTTAATCATTTTTGTACACTCCAGATTTTAT
CCCCCTTCTGTTCTACCCTCTGATTGTTCTACATTCCATACCTCCTCCCC
ACTCCCAGCTCCTATCTTCATGTGGATGTCTCTGCCCTCCCCCACTCCCC
ATCCCACCAGACCTCCCCACTCCCTGGGGCCTCCAGACACTTGAGGGTTA
AGTGCATCATCTCTGACTGAGCCCAGACTGAAAACAGTCCTCTGCTGTAT
ATGTGTTGGGGGCCTCATATCTGCTTGTGTATGCTACCTGGTTGATAGTC
CAGTGTCTGAGAGATCTTGGGGATCCTGTAATTATAAATGGCTGTAAGTG
AAGAGTTAAATAATGAAGATTGGCTGTCAATAGGTTTTTTTTTTCCACAG
AAATACACACATTTAAGATGTTACCTTCATTGAGGCATTACCTTCATTGT
AATTCTGTTGAACTGAATATGGTATGTTTATTATTCTGAGGTCATCTTTA
ATAAGAAATATTTACTATTACACTTTGTAATCCAAC

AAAANCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGTGTAATTTTGATAGGTATA
CTTTCATATGTTGTTTTTCCTTTTTCTGTCACTGCTTTTCATATTCTTTC
TTTGGTCTGTCCATTTAGTGTTCTGATTATTATATAAGGAGAGGATTTTC
TTTTCTGTTCCAATCTATTTGGTGTTTTGTTGGCTTCTTTACATTAATGG
CCATCCCATTCTTCAGGTGTGGGAAGTTTCCTTTTATGATTTTCTTGCAG
ATGTTTTCTGTCCCTTTGAACTGGGGTTCTTTACTCTCTTCTATTCCCAT
TATTATTAGAATTGGTCCTTTCATTGTGTCATGAATTTCCTGGGTATTTT
GTGTGAGAAGCTTTTTACACTTTCTATTTTCTTTGACTGTTGTGCCTCCC
TGCTTTCATGTAGTAGTAGCCTATGGGTTAGGAAGAAATGCTTGCTTGAG
TTAGGGTCTGTTAAAAAGCAAGGAGTAGAGAGAAGGAAGTTTGAAAGGGA
CAGTCCATGGGATCCACTAGAGATCCTGTGGTTGGAGGCTGCCATGAGTG
TTCTATTGCAGAGCTCAGGATGAGCCTGGGGATTAAGTTTTTGGGAACAG
ATGGAAAGATGAAGCTCTGTAGTCGGCCTATCTGGTTCTATGTCTTG

Query= MSMg01no149_h02.b1 MSMg01no149_h02.b1 CHROMAT_FILE:
MSMg01no149_h02.b1 PHD_FILE: MSMg01no149_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:43 2005
         (613 letters)



>mm_chr9_11093627_11094638
          Length = 1012

 Score = 1122 bits (580), Expect = 0.0
 Identities = 605/614 (98%), Gaps = 4/614 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgctgtgatttatctattttatccttcctcatccagcacctctccatctcatcagagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tctgctgtgatttatctattttatccttcctcatccagcacctctccatctcatcagagc 261

                                                                       
Query: 61  attctctccactctcatttttattttttaaattttatttaatcattttt-gtacactcca 119
           |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 262 attctctccactctcatttttaatttttaaattttatttaatcattttttgtacactcca 321

                                                                       
Query: 120 gattttatcccccttctgttctaccctctgattgttctacattccatacctcctccccac 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gattttatcccccttctgttctaccctctgattgttctacattccatacctcctccccac 381

                                                                       
Query: 180 tcccagctcctatcttcatgtggatgtctctgccctcccccactccccatcccaccagac 239
           ||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 382 tcctagctcctgtcttcatgtggatgtctctaccctcccccactccccatcccaccagac 441

                                                                       
Query: 240 ctccccactccctggggcctccagacacttgagggttaagtgcatcatctctgactgagc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctccccactccctggggcctccagacacttgagggttaagtgcatcatctctgactgagc 501

                                                                       
Query: 300 ccagactgaaaacagtcctctgctgtatatgtgttgggggcctcatatctgcttgtgtat 359
           ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 502 ccagactgaaaacagtcctctgctgtat--gtgttgggggcctcatatctgcttgtgtat 559

                                                                       
Query: 360 gctacctggttgatagtccagtgtctgagagatcttggggatcctgtaattataaatggc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gctacctggttgatagtccagtgtctgagagatcttggggatcctgtaattataaatggc 619

                                                                       
Query: 420 tgtaagtgaagagttaaataatgaagattggctgtcaataggttttttttttccacagaa 479
           |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 620 tgtaagtgaagagttaaataatgaagattggctgtcaataggatttttttt-ccacagaa 678

                                                                       
Query: 480 atacacacatttaagatgttaccttcattgaggcattaccttcattgtaattctgttgaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 atacacacatttaagatgttaccttcattgaggcattaccttcattgtaattctgttgaa 738

                                                                       
Query: 540 ctgaatatggtatgtttattattctgaggtcatctttaataagaaatatttactattaca 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ctgaatatggtatgtttattattctgaggtcatctttaataagaaatatttactattaca 798

                         
Query: 600 ctttgtaatccaac 613
           ||||||||||||||
Sbjct: 799 ctttgtaatccaac 812


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1012
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1002
Effective search space:   604206
Effective search space used:   604206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)