Query= MSMg01no150_m11.b1 MSMg01no150_m11.b1 CHROMAT_FILE:
MSMg01no150_m11.b1 PHD_FILE: MSMg01no150_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:25 2005
(370 letters)
>mm_chr9_49044069_49044838
Length = 770
Score = 615 bits (318), Expect = e-180
Identities = 354/366 (96%)
Strand = Plus / Plus
Query: 5 gaattccctcagttctcaaattttatactatgatgactatacttcaacattttcactgtg 64
|||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 205 gaattccctcagctctaaaattttatactataatgactatacttcaacattttcactgtg 264
Query: 65 aagactacaatacatcaaactgaccggcaatccataccatgagagagaaggatcatctgg 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagactacaatacttcaaactgaccggcaatccataccatgagagagaaggatcatctgg 324
Query: 125 gagactgaaaaatatagatgacaaggagagagatgtggtgatgtaggactgtaacaccag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 325 gagactgaaaaatatagatgacaaggagagagatgtggtgatgtaggactgtaacactag 384
Query: 185 cacccaacaggtagaagcagaatgtcatgaacttgaggttggcccgggcaacatgaggcc 244
||||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 385 cacccaacaggtagaggcagaatgtcgtgaacttgaggttggcctgggcaacacgaggcc 444
Query: 245 ttgcttcacaaaaaggaagaatgcaaactaattaaaaaataaataaaaccaaaacataga 304
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 445 ttgcttcacaaaaaggaagaatgcaaacaaattaaaaaataaataaaacctaaacataga 504
Query: 305 tgccagggagttaagatacatgcctgtaatctcataggcaggagaaattggaagggtctc 364
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 505 tgccagggagttaagatacatgcctgtaatttcataggcaggagaaattggaagggtctc 564
Query: 365 caatca 370
||||||
Sbjct: 565 caatca 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_m11.g1 MSMg01no150_m11.g1 CHROMAT_FILE:
MSMg01no150_m11.g1 PHD_FILE: MSMg01no150_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:25 2005
(247 letters)
>mm_chr9_49180922_49181570
Length = 649
Score = 458 bits (237), Expect = e-133
Identities = 246/249 (98%), Gaps = 2/249 (0%)
Strand = Plus / Minus
Query: 1 ctaactggctgccattaacctgactatgac-tttttttttaattcaagaatacagta-tt 58
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 362 ctaactggctgccattaacctgactatgacttttttttttaattcaagaatacagtattt 303
Query: 59 tttattattaaactcataaaaataagaatgtgtatgtttaatatagtgcattatctctgt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tttattattaaactcataaaaataagaatgtgtatgtttaatatagtgcattatctctgt 243
Query: 119 acaaataagggagattaaatttaatgtttcaagactatatttgttagtatgagaatggct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 242 acaaataagggagattaaatttaatgtttcaagactatatttgttagtatgagaatgcct 183
Query: 179 cccataacttcatatgttttaatacttggtctccagttggtggaactgtttgggaagggt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cccataacttcatatgttttaatacttggtctccagttggtggaactgtttgggaagggt 123
Query: 239 taggaggtg 247
|||||||||
Sbjct: 122 taggaggtg 114
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 649
Length adjustment: 9
Effective length of query: 238
Effective length of database: 640
Effective search space: 152320
Effective search space used: 152320
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
