Query= MSMg01no151_m03.b1 MSMg01no151_m03.b1 CHROMAT_FILE:
MSMg01no151_m03.b1 PHD_FILE: MSMg01no151_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:39 2005
(179 letters)
>mm_chr9_52259543_52260121
Length = 579
Score = 323 bits (167), Expect = 4e-93
Identities = 176/179 (98%)
Strand = Plus / Plus
Query: 1 aaaacactgagcatgagttataaccaatataggatagaaataccatttggaaggcatctc 60
|||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 201 aaaacactgagcataagttataaccaatatagggtagaaataccatttagaaggcatctc 260
Query: 61 acttcttaggtcttttattagctacattcagaaagaaataaacctgcactcggttactaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttcttaggtcttttattagctacattcagaaagaaataaacctgcactcggttactaa 320
Query: 121 gagactggtgacaagcatcagggaagaaacacctacaggctgtttgaaactttaggcta 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagactggtgacaagcatcagggaagaaacacctacaggctgtttgaaactttaggcta 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no151_m03.g1 MSMg01no151_m03.g1 CHROMAT_FILE:
MSMg01no151_m03.g1 PHD_FILE: MSMg01no151_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:39 2005
(247 letters)
>mm_chr9_52402825_52403471
Length = 647
Score = 458 bits (237), Expect = e-133
Identities = 244/247 (98%), Gaps = 2/247 (0%)
Strand = Plus / Minus
Query: 1 gaggttaaacatggacttaattgtaattcagaatctctgtatttatttttttttaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 506 gaggttaaacatggacttaattgtaattcagaatctctgtatttatttttttt--aaaaa 449
Query: 61 agaggtttgtagttgtgtgtttggatgaataacagtggattaaaaaaactggttggtgtc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 448 agaggtttgtagttgtgtgtttggttgaataacagtggattaaaaaaactggttggtgtc 389
Query: 121 aaatctcagccactattgagaaaacattaatacttaaaatcacagactagcttcttattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaatctcagccactattgagaaaacattaatacttaaaatcacagactagcttcttattg 329
Query: 181 gtctgcttcattcttttcttctaatctgacttccagttgaagcatcttccaaggtgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtctgcttcattcttttcttctaatctgacttccagttgaagcatcttccaaggtgtttt 269
Query: 241 gtctttc 247
|||||||
Sbjct: 268 gtctttc 262
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
