Query= MSMg01no151_p13.b1 MSMg01no151_p13.b1 CHROMAT_FILE:
MSMg01no151_p13.b1 PHD_FILE: MSMg01no151_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:56 2005
(370 letters)
>mm_chr9_44107301_44108070
Length = 770
Score = 700 bits (362), Expect = 0.0
Identities = 365/366 (99%)
Strand = Plus / Minus
Query: 5 gaattctcctgcttgcggcaggaatgtggcttttgctctctggacagttctgccgacctc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaattctcctgcttgtggcaggaatgtggcttttgctctctggacagttctgccgacctc 511
Query: 65 atccgccatgtctacttccactgctaccacaccaagctaaaacagtgggggctgcaagcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atccgccatgtctacttccactgctaccacaccaagctaaaacagtgggggctgcaagcc 451
Query: 125 ttacaaagccaggctgacctcagcccctgcatcctggactttcagagccggaacgtcatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ttacaaagccaggctgacctcagcccctgcatcctggactttcagagccggaacgtcatc 391
Query: 185 cctgacacccctgaccatttcctgtgcctgtgggaacattgcgaggtcagcagatagtgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cctgacacccctgaccatttcctgtgcctgtgggaacattgcgaggtcagcagatagtgc 331
Query: 245 cagacatggggtggaaggaagctgggaaccttgactctttctggggtgccttatatttct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cagacatggggtggaaggaagctgggaaccttgactctttctggggtgccttatatttct 271
Query: 305 gagactcgtgctagtatatctcatctattcttgtgtaagtcctttgtcttaaaacttggt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gagactcgtgctagtatatctcatctattcttgtgtaagtcctttgtcttaaaacttggt 211
Query: 365 tgttcc 370
||||||
Sbjct: 210 tgttcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_p13.g1 MSMg01no151_p13.g1 CHROMAT_FILE:
MSMg01no151_p13.g1 PHD_FILE: MSMg01no151_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:56 2005
(345 letters)
>mm_chr9_44006537_44007281
Length = 745
Score = 646 bits (334), Expect = 0.0
Identities = 340/342 (99%), Gaps = 1/342 (0%)
Strand = Plus / Plus
Query: 1 aaggcctgcctgggatacatgagaaccttctccaaaaatgtagaagaaagaactctcaac 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggcttgcctgggatacatgagaaccttctccaaaaatgtagaagaaagaactctcaac 260
Query: 61 aacccacaatgaaaacattattatttcatccactggatgaggaaatagaaataacatagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacccacaatgaaaacattattatttcatccactggatgaggaaatagaaataacatagc 320
Query: 121 taaaaaagtggctaagaaaagattaaaaacctacaaattggctttagagtttaactactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaaaagtggctaagaaaagattaaaaacctacaaattggctttagagtttaactactt 380
Query: 181 agtcactatactatactggctctcaagtcattgtggtgatttgagagaaaatggccccca 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 agtcactatactatactggctctca-gtcattgtggtgatttgagagaaaatggccccca 439
Query: 241 taggctcacagggagtggcactattaagaggtgtggccttgtcagagtgggtgtagcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taggctcacagggagtggcactattaagaggtgtggccttgtcagagtgggtgtagcttt 499
Query: 301 gttggaggaagagagtcactagggggggtgggctttgaattc 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gttggaggaagagagtcactagggggggtgggctttgaattc 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
