Query= MSMg01no153_c14.b1 MSMg01no153_c14.b1 CHROMAT_FILE:
MSMg01no153_c14.b1 PHD_FILE: MSMg01no153_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:28 2005
(576 letters)
>mm_chr9_122576015_122576990
Length = 976
Score = 822 bits (425), Expect = 0.0
Identities = 425/425 (100%)
Strand = Plus / Minus
Query: 1 aaaggtctgaatgcaacaatcacaaaggggtgggcaggccaaggcttccaggtctagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaggtctgaatgcaacaatcacaaaggggtgggcaggccaaggcttccaggtctagagg 566
Query: 61 aatagccttaaggtcccagtgcaccagggaggtgggggctgctcttccccatccactgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatagccttaaggtcccagtgcaccagggaggtgggggctgctcttccccatccactgag 506
Query: 121 accagccctgtcttgtgctcttaatgcataaatacgtcctgcaggggacccagcctgggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 accagccctgtcttgtgctcttaatgcataaatacgtcctgcaggggacccagcctgggt 446
Query: 181 tattggaaattgtgttttgtgctttgggcctgataaccctgggaggttcaccatcttgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tattggaaattgtgttttgtgctttgggcctgataaccctgggaggttcaccatcttgac 386
Query: 241 atcctggttttgtttctggtccatcttcaatgtgggttattagaaatcctggaacaacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atcctggttttgtttctggtccatcttcaatgtgggttattagaaatcctggaacaacct 326
Query: 301 tccctgccccctctctgtaaggcactcccctcccccagccctcagtcctggctgccaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tccctgccccctctctgtaaggcactcccctcccccagccctcagtcctggctgccaggg 266
Query: 361 ctgatttcaagagtgtgagtgtcattaactgacattcatcaaaacactcctccttgttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgatttcaagagtgtgagtgtcattaactgacattcatcaaaacactcctccttgttcc 206
Query: 421 caggc 425
|||||
Sbjct: 205 caggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_c14.g1 MSMg01no153_c14.g1 CHROMAT_FILE:
MSMg01no153_c14.g1 PHD_FILE: MSMg01no153_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:28 2005
(548 letters)
>mm_chr9_122419486_122420434
Length = 949
Score = 1011 bits (523), Expect = 0.0
Identities = 538/543 (99%), Gaps = 1/543 (0%)
Strand = Plus / Plus
Query: 1 atgcctgatca-taaataagacctgggccagaaccaggcttcaggagacccagactgcag 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgcctgatcaataaataagacctgggccagaaccaggcttcaggagacccagactgcag 260
Query: 60 caaagggaagagagcaacggtgtgttctgaatctagtaggcagccagctatccctcagag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaagggaagagagcaacggtgtgttctgaatctagtaggcagccagctatccctcagag 320
Query: 120 actcttaccagtgagcccgtgccttgagagcttagaagacaggctgagggaatacagaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actcttaccagtgagcccgtgccttgagagcttagaagacaggctgagggaatacagaat 380
Query: 180 atggagttgtacagaaatatgaagtggagcagagaccaatggagcctacggcaacaaaac 239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 atggagttgtacagaaatatgaagtggagcagagaccaatggagcctagggcaacaaaac 440
Query: 240 tccatgaatgacacagaagcctcctgccttcatggcaccttactaacaccccctcatcag 299
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccaggaaggacacagaagcctcctgccttcatggcaccttactaacaccccctcatcag 500
Query: 300 gatgtacctggggcagacaaagaagccttccataactcagcacttgctgttttcctctcc 359
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatgtacctggggcagacgaagaagccttccataactcagcacttgctgttttcctctcc 560
Query: 360 tgtctcctgtggccctccacaccccacaactgccaacttcctacttcatcctatgaccaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtctcctgtggccctccacaccccacaactgccaacttcctacttcatcctatgaccaa 620
Query: 420 agaagtatcagcattcaaacttccaccatagagtgccaggctcgctatgctaaacataga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaagtatcagcattcaaacttccaccatagagtgccaggctcgctatgctaaacataga 680
Query: 480 aaagcaaatacaggccttactatttgcatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaagcaaatacaggccttactatttgcatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtg 740
Query: 540 tgt 542
|||
Sbjct: 741 tgt 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 949
Length adjustment: 10
Effective length of query: 538
Effective length of database: 939
Effective search space: 505182
Effective search space used: 505182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
