Query= MSMg01no155_f22.b1 MSMg01no155_f22.b1 CHROMAT_FILE:
MSMg01no155_f22.b1 PHD_FILE: MSMg01no155_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:16 2005
(571 letters)
>mm_chr9_91062642_91063612
Length = 971
Score = 1065 bits (551), Expect = 0.0
Identities = 566/571 (99%)
Strand = Plus / Minus
Query: 1 taatttgattagcgatcctgcacactagtgttgattttcatcagttgtacacaacacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 taatttgattagcgatcctgcacactagtgttgattttcatcagttgtacacaacacaat 712
Query: 61 ctcatgaagtctaatgaaaattgtattacatcaagaaaactggttttaaaattgctgaat 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ctcataaagtctaatgaaaattgtattacatcaagaaaactggttttaaaattgctgaat 652
Query: 121 gtgccccgtgatagatgactggagagttcctagtgtctgaagattccagtctctgtgtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gtgccccgtgatagatgactggagagttcctagtgtctgaagattccagtctctgtgtat 592
Query: 181 aaatttcaaactcaagcgaagaaaaatgctccctctacattaagttaattttcttgggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aaatttcaaactcaagcgaagaaaaatgctccctctacattaagttaattttcttgggac 532
Query: 241 agaagaccttttaagaggatgccagtttgcccaatgaatggccaaagtgtttattcagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 agaagaccttttaagaggatgccagtttgcccaatgaatggccaaagtgtttattcagct 472
Query: 301 gaggtttggacaaaagccacatcagtgtcacagtgtctcagcacatgtgaggaaaatgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gaggtttggacaaaagccacatcagtgtcacagtgtctcagcacatgtgaggaaaatgca 412
Query: 361 tgtggtctacagcaaattaggtgccttgccctgaggctggtgagatggggttcacttgca 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 411 tgtggtctacagcaaattaggtgcctttccctgaggctggtgagatggggttcacttgca 352
Query: 421 cttgtagcaatgccttgatgctgtcagccgtggttttgagaagagccttagagagcttcg 480
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 351 cttgtagcaatgccttgatgctgtcagctgtggttttgagaagagccttagagagctttg 292
Query: 481 ttacagatgtttctttcataaagtcttgtgggagaatgacattttgcaagaaatggtttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ttacagatgtttctttcataaagtcttgtgggagaatgacattttgcaagaaatggtttg 232
Query: 541 ctgctctttttttcttttcttggagaaacaa 571
|||||||||||||||| ||||||||||||||
Sbjct: 231 ctgctctttttttcttctcttggagaaacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_f22.g1 MSMg01no155_f22.g1 CHROMAT_FILE:
MSMg01no155_f22.g1 PHD_FILE: MSMg01no155_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:16 2005
(542 letters)
>mm_chr9_90966067_90967011
Length = 945
Score = 975 bits (504), Expect = 0.0
Identities = 535/546 (97%), Gaps = 4/546 (0%)
Strand = Plus / Plus
Query: 1 agtatccagtacccacaaaatggaaagataaaagcatgctcgtgagttgtggtctccaca 60
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 200 agtatccagtacccacaaaatgtaaagataaaagcatgctcgtgagttgtgatctccaca 259
Query: 61 cccaatgcatgcatgcatgaataaataaatgaatggatggatggatgaatgaatgaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cccaatgcatgcatgcatgaataaataaatgaatggatggatggatgaatgaatgaaatg 319
Query: 121 cagcttaaacacttgggctagagagatggctcagagattaatattgattactactcttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cagcttaaacacttgggctagagagatggctcagagattaatattgattactactcttgc 379
Query: 181 agaggacccaggactcatatcaggcagctcacagtaacctctagctccaggggatccagc 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agaggacccagcactcatatcaggcagctcacagtaacctctagctccaggggatccagc 439
Query: 241 accctcttctggtgtactgcattcatatacacagattaataataaaa-taaaatcctaca 299
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 440 accctcttctggtgtactgcattcatatacacagattaataataaaaataaaatcctaca 499
Query: 300 caaaaataaacaagcaacctttctaataaataatttacagaaagttgttatataaaatca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caaaaataaacaagcaacctttctaataaataatttacagaaagttgttatataaaatca 559
Query: 360 ttttttaaaaattattatgtggcttataaactactaggcactctggtccattttctaaga 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 560 ttttttaaaaattattatgtggcttataaactactaggcactctgatccattttctaaga 619
Query: 420 gttttgatgagacaggcccaatcttaatatgaatcattttatgagcacattttctgattt 479
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 620 gttttgatgagacaggcccaatcttaatatgaatcattttatgagcacatttcctgattt 679
Query: 480 cttccttatgcattttaagtcacaaaagatactc--gaatat-atacctgctattgttga 536
||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 680 ctttcttatgccttttaagtcacaaaagatactcttgaatatgatacctgctattgttga 739
Query: 537 ttagat 542
||||||
Sbjct: 740 ttagat 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 945
Length adjustment: 10
Effective length of query: 532
Effective length of database: 935
Effective search space: 497420
Effective search space used: 497420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
