Query= MSMg01no155_k22.b1 MSMg01no155_k22.b1 CHROMAT_FILE:
MSMg01no155_k22.b1 PHD_FILE: MSMg01no155_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:38 2005
(362 letters)
>mm_chr9_86587568_86588330
Length = 763
Score = 654 bits (338), Expect = 0.0
Identities = 353/360 (98%), Gaps = 5/360 (1%)
Strand = Plus / Plus
Query: 6 gaattctgtcctaatatcac---gacaggggacttttgagtatatagcagatgatgttaa 62
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctgtcctaata--acaaagacaggggacttttgagtatatagcagatgatgttaa 263
Query: 63 tgccacaggcatcacgctgaccccagggctgagtaagtaaagttccttctattgattgtc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgccacaggcatcacgctgaccccagggctgagtaagtaaagttccttctattgattgtc 323
Query: 123 ccaagatgacccagatttgtaatccaacttgatacactgcaggtaaaatgtgtgcacaca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccaagatgacccagatttgtaatccaacttgatacactgcaggtaaaatgtgtgcacaca 383
Query: 183 ttaagactgtacttttctacctttggtgtaagatctttgtgacagtatcgtttctacagt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttaagactgtacttttctacctttggtgtaagatctttgtgacagtatcgtttctacagt 443
Query: 243 gggtatcaactgttacaggttagcaggagactccaaacccagttaagtatgcctttgcta 302
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 444 gggtatcaactgttacaggttagcaggagactccaaacccagtaaagtatgcctttgcta 503
Query: 303 tgggatgggatgggctggtctgtctacccactcttaacaaacatttcaaccttgacttaa 362
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgggatgggatgggctggcctgtctacccactcttaacaaacatttcaaccttgacttaa 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 763
Length adjustment: 9
Effective length of query: 353
Effective length of database: 754
Effective search space: 266162
Effective search space used: 266162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_k22.g1 MSMg01no155_k22.g1 CHROMAT_FILE:
MSMg01no155_k22.g1 PHD_FILE: MSMg01no155_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:38 2005
(189 letters)
>mm_chr9_86723007_86723595
Length = 589
Score = 342 bits (177), Expect = 6e-99
Identities = 186/189 (98%)
Strand = Plus / Minus
Query: 1 ttcagcgtgttactctgaatctcttttctccttatgcctttggtcttttcaacatgccgc 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttcagcttgttactctgaatctcttttctccttatgcctttggtcttttcaacatgccgc 330
Query: 61 ccctcagtggtgctcatcttcctggcctctgctgcctgtcagcagtgatgtgttgttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ccctcagtggtgctcatcttcctggcctctgctgcctgtcagcagtgatgtgttgttggt 270
Query: 121 tctttctcatcctctctcggttagctttattcccacttggccatgaatttgctgcctgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 269 tctttctcatcctctctcggttagctttattcccacttggccatgaatttggtgcccgcc 210
Query: 181 attcactta 189
|||||||||
Sbjct: 209 attcactta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
