Query= MSMg01no157_h08.b1 MSMg01no157_h08.b1 CHROMAT_FILE:
MSMg01no157_h08.b1 PHD_FILE: MSMg01no157_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:48 2005
(314 letters)
>mm_chr9_77363917_77364630
Length = 714
Score = 590 bits (305), Expect = e-173
Identities = 308/309 (99%)
Strand = Plus / Plus
Query: 5 gaattcaccaaacaccggagggagaggccaatatgatatccaggcttcttgatctaaggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccaaacaccggagggagaggccaatatgatatccaggcttcttgatctaaggc 264
Query: 65 tgcccaaattagcattcaagatcactttccaaattttcagatttgcaaaggaccataata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcccaaattagcattcaagatcactttccaaattttcagatttgcaaaggaccataata 324
Query: 125 aactacatacaaagcctgctctgcctctgttgcatagtaagatttcgaatctactaacat 184
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 325 aactacatacaaagcctgctctgcctctgttgcatagtaagattttgaatctactaacat 384
Query: 185 tatgagctatacaagggaatataaaccaaacttaggagtcaaataactgtatttccagtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatgagctatacaagggaatataaaccaaacttaggagtcaaataactgtatttccagtc 444
Query: 245 atggctctgagtatctaaagaccggccatgagcaacgaatcagacttgcttgatatagtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atggctctgagtatctaaagaccggccatgagcaacgaatcagacttgcttgatatagtc 504
Query: 305 taacaccaa 313
|||||||||
Sbjct: 505 taacaccaa 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_h08.g1 MSMg01no157_h08.g1 CHROMAT_FILE:
MSMg01no157_h08.g1 PHD_FILE: MSMg01no157_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:48 2005
(287 letters)
>mm_chr9_77475507_77476193
Length = 687
Score = 536 bits (277), Expect = e-157
Identities = 284/287 (98%), Gaps = 2/287 (0%)
Strand = Plus / Minus
Query: 1 tcctgtaatgtcagcaccatggaagactgagacaagaggatgggcaagttctaggccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tcctgtaatgtcagcaccatggaagactgagacaagaggatgggcaagttctaggccagc 531
Query: 61 ctattctaaatagtgagatcttgtctcagaaatgaacaatgaa--tttttttgttaaaca 118
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 530 ctattctaaatagtgagatcttgtctcagaaatgaacaatgaatttttttttgttaaaca 471
Query: 119 ataacaataacaacaaccacaaaaactttggtaggcattgtagatagtgtagatttctcc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ataacaataacaacaaccacaaaaactttggtaggcattgtagatagtgtagatttctcc 411
Query: 179 tgggtgtttcttgctgctacctgaatcttgctctgttatccaagcatcaatgactgcttt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tgggtgtttcttgctgctacctgaatcttgctctgttatccaagcatcaatgactgcttt 351
Query: 239 aaaaagtctcaaaaaggtatgtgggagaaatatgaactataaaaaga 285
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 350 aaaaagtctcagaaaggtatgtgggagaaatatgaactataaaaaga 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
