Query= MSMg01no157_i01.b1 MSMg01no157_i01.b1 CHROMAT_FILE:
MSMg01no157_i01.b1 PHD_FILE: MSMg01no157_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:51 2005
(319 letters)
>mm_chr9_28022203_28022919
Length = 717
Score = 572 bits (296), Expect = e-168
Identities = 312/324 (96%), Gaps = 12/324 (3%)
Strand = Plus / Minus
Query: 5 gaattcaccttaaactaagagtggctagtgtggtgatctctttgacccct-----ccccc 59
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 573 gaattcaccttaaactaagagtggctagtgtggtgatctctttgacccctccttcccccc 514
Query: 60 ccct-------gcaaaggcattatcaaagtcagaaaataagtaatcatggtactgaaagt 112
|||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ccctcccccccgcaaaggcattatcaaagtcagaaaataagtaatcatggtactgaaagt 454
Query: 113 tttctaggatgttcagaataatatgtaaaacaagttgttgcctcttggcatggagctctt 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tttctaggatgttcagaataatatgtaaaacaagttgttgcctcttggcatggagctctt 394
Query: 173 gtaggatgccaaggtctgcttctggtttctgcctttgtaggttgtcttcgcaggtaaaaa 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gtaggatgccaaggtctgcttctggtttctgcctttgtaggttgtcttcgcaggtaaaaa 334
Query: 233 tacttcagaaaaccatgcccagccttcatcccagctttctgcgccaaggtaaaaatcctg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tacttcagaaaaccatgcccagccttcatcccagctttctgcgccaaggtaaaaatcctg 274
Query: 293 gactacaaaatgtactagtgaaca 316
||||||||||||||||||||||||
Sbjct: 273 gactacaaaatgtactagtgaaca 250
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 717
Length adjustment: 9
Effective length of query: 310
Effective length of database: 708
Effective search space: 219480
Effective search space used: 219480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_i01.g1 MSMg01no157_i01.g1 CHROMAT_FILE:
MSMg01no157_i01.g1 PHD_FILE: MSMg01no157_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:51 2005
(291 letters)
>mm_chr9_27839715_27840405
Length = 691
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 1 ccaacttagttcagcttattcttcctagtttgattctccattgtgtatgcagggctgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaacttagttcagcttattcttcctagtttgattctccattgtgtatgcagggctgaga 260
Query: 61 tgtaaatgatagattctaagcctttggttatttatcacagtagacaactttggatcttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtaaatgatagattctaagcctttggttatttatcacagtagacaactttggatcttaa 320
Query: 121 tgcattcaaagccccagctctctaggagtgtcctgcctgcgtacactggggacgaccacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcattcaaagccccagctctctaggagtgtcctgcctgcgtacactggggacgaccacc 380
Query: 181 ttcagtctagaatttacttgcttttcttaacggcctctagggtactgagacaattggctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcagtctagaatttacttgcttttcttaacggcctctagggtactgagacaattggctt 440
Query: 241 tgtgcttttaaactctgaaaaataagtgttctgtcagtaaacaaaatga 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgcttttaaactctgaaaaataagtgttctgtcagtaaacaaaatga 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
