Query= MSMg01no162_e12.b1 MSMg01no162_e12.b1 CHROMAT_FILE:
MSMg01no162_e12.b1 PHD_FILE: MSMg01no162_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:36 2005
(299 letters)
>mm_chr9_58246013_58246711
Length = 699
Score = 528 bits (273), Expect = e-154
Identities = 290/301 (96%), Gaps = 10/301 (3%)
Strand = Plus / Plus
Query: 4 ggaattccaaatggagagattagataactttccaaggtcacctggttggttggttagtta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaaatggagagattagataactttccaaggtcacctggttggttggttagtta 263
Query: 64 aggaattaaggcccaagtcccagtatgcttacctttagagcccattcccctacacagatg 123
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aggaattaaggtccaagtcccagtatgcttacctttagagcccattcccctacacagatg 323
Query: 124 accctaggaactttctagacataaagctaatcattattatacgagtcaatcttcctggag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 accctaggaactttctagacataaagctaatcattattatacgagtcaatcttcctggag 383
Query: 184 acatgaggaaatagatggggagggtgtatttcctctcccttggtatgcctaggtttgtat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acatgaggaaatagatggggagggtgtatttcctctcccttggtatgcctaggtttgtat 443
Query: 244 agccagctagtgagcggaggtgttattttt-----aagcttaatcccagagggccaagac 298
||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 444 agccagctagtgagcggaggtgtta-----gcacgaagcttaatcccagagggccaagac 498
Query: 299 t 299
|
Sbjct: 499 t 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_e12.g1 MSMg01no162_e12.g1 CHROMAT_FILE:
MSMg01no162_e12.g1 PHD_FILE: MSMg01no162_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:36 2005
(277 letters)
>mm_chr9_58396944_58397620
Length = 677
Score = 503 bits (260), Expect = e-147
Identities = 272/276 (98%)
Strand = Plus / Minus
Query: 1 aggtgtacgtttcatggtctgctgggatctgccgtctgatttgggctcctatgctcctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aggtgtacgtttcatggtctgctgggatctgccgtctgatttgggctcctatgctcctgt 417
Query: 61 cctttcatttctttccattctggctggccgtcttctgagcctcttgatgatgtatgtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 cctttcatttctttccattctggctggccgtcttctgagcctcttgatgatgtatgtgtg 357
Query: 121 cacgtgtgtgcccccttgtgtctgtctgcccaggtcagcttctcacctcttcaggtgact 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cacgtgtgtgcccctttgtgtctgtctgcccaggtcagcttctcacctcttcaggtgact 297
Query: 181 ctgagttcaagatggcatcatgttgctttaagtgtcctcaaagatgctcattgatttgat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ctgagttcaagatggcatcatgttgctttaagtgtcctcaaagatgctcattgatttgag 237
Query: 241 ttcctcttcctaagcagaaaggagtgaaaaaggagg 276
||||||||||||||||||||||||||||||||||
Sbjct: 236 ggcctcttcctaagcagaaaggagtgaaaaaggagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
