Query= MSMg01no163_c09.b1 MSMg01no163_c09.b1 CHROMAT_FILE:
MSMg01no163_c09.b1 PHD_FILE: MSMg01no163_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:41 2005
(315 letters)
>mm_chr9_70788035_70788749
Length = 715
Score = 567 bits (293), Expect = e-166
Identities = 307/313 (98%), Gaps = 3/313 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtaaatcatctccccccacccccttagcactgaaggagggttgggctggaacc 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtaaaccatctccccccacccccttagcactgaaggagggttgggctggaacc 264
Query: 65 ccctccctaagctcctttgtagacatctcaggctgggtcagacaactgactcctcctatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccctccctaagctcctttgtagacatctcaggctgggtcagacaactgactcctcctatc 324
Query: 125 aggattccagctgtggatgtgaaacaaccagaaaaaaacagagggacagctccaaccctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggattccagctgtggatgtgaaacaaccagaaaaaaacagagggacagctccaaccctc 384
Query: 185 caagttccagcagtttgcttttggggttagaccagtgtttctgaacctgttggtcgtgac 244
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 385 caagttccggcagtttgcttttggggttagaccagtggttctgaacctgttggtcgtgac 444
Query: 245 ccattgggggggg---tgtcacataccagatattctgcatatcagatatttacattagga 301
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccattgggggggggggtgtcacataccagatattctgcatatcagatatttacattagga 504
Query: 302 ttcatagcaacag 314
|||||||||||||
Sbjct: 505 ttcatagcaacag 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_c09.g1 MSMg01no163_c09.g1 CHROMAT_FILE:
MSMg01no163_c09.g1 PHD_FILE: MSMg01no163_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:41 2005
(277 letters)
>mm_chr9_70924077_70924753
Length = 677
Score = 518 bits (268), Expect = e-151
Identities = 274/276 (99%)
Strand = Plus / Minus
Query: 1 agctgtctagcaccaagcctggaggagagggtgatagattcggtaatttaaaatttcctc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 476 agctgtctagcaccaagcctggaggagagggtgatagattaggtaatttaaaatttcctc 417
Query: 61 ttcatgccagaattttatctatagagacaacatgtttcttggcaatgatctcttagggaa 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ttcgtgccagaattttatctatagagacaacatgtttcttggcaatgatctcttagggaa 357
Query: 121 cgcttcagctaggtttgcacgcaaggtgctgcatgagcctgcagtatctgcagagacggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cgcttcagctaggtttgcacgcaaggtgctgcatgagcctgcagtatctgcagagacggt 297
Query: 181 ttcttagccttagaaaaaagagcccgtgcctgaaatacttgcggagacagtaatctctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ttcttagccttagaaaaaagagcccgtgcctgaaatacttgcggagacagtaatctctgt 237
Query: 241 attttgggcaagattcctatagagttctgggagttg 276
||||||||||||||||||||||||||||||||||||
Sbjct: 236 attttgggcaagattcctatagagttctgggagttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
