Query= MSMg01no164_m21.b1 MSMg01no164_m21.b1 CHROMAT_FILE:
MSMg01no164_m21.b1 PHD_FILE: MSMg01no164_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:45 2005
(313 letters)
>mm_chr9_123336299_123337011
Length = 713
Score = 542 bits (280), Expect = e-158
Identities = 300/308 (97%), Gaps = 3/308 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaggtgtgtagtactgtgctcttgaatatatagttcttaactaaatgatacatg 63
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 677 ggaattcaggtgtgtagtactgtgctcttgaatatgtagttcttaactaaatgatacatg 618
Query: 64 gaaggtgagggctgggtgcagctcatggtagaatgctttgccaacagtgtgtgaactact 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gaaggtgagggctgagtgcagctcatggtagaatgctttgccaacagtgtgtgaactact 558
Query: 124 aaatatgatcctcagctccaaagggaagattaaaaaaaaaaaaaaaaaggaacacacagt 183
||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 557 aaatatgatcctcagcttcaaagggaagatt---gaaaaaaaaaaaaaggaacacacagt 501
Query: 184 ttcactgagaagcaaaacccatcacagaatcaatagtaaactcttccaagtgacagcaag 243
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 500 ttcactgagaagcaaaacccatcacagaatcaatagtaaactcctccaagtgacagcaag 441
Query: 244 agctgtcagccctttgcccttaaccctgcataatttattagcatgtatgacatctaaaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agctgtcagccctttgcccttaaccctgcataatttattagcatgtatgacatctaaaca 381
Query: 304 accacata 311
||||||||
Sbjct: 380 accacata 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_m21.g1 MSMg01no164_m21.g1 CHROMAT_FILE:
MSMg01no164_m21.g1 PHD_FILE: MSMg01no164_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:45 2005
(251 letters)
>mm_chr9_123176276_123176926
Length = 651
Score = 441 bits (228), Expect = e-128
Identities = 237/240 (98%)
Strand = Plus / Plus
Query: 1 agggggtttctgtgaattcagggggtttcaatttggcacatctggcagatggaactggct 60
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 201 agggggtttctgtgaattcagggggtttcaatttggcacacctgggagatggaactggct 260
Query: 61 gtcaaagccaaagcaatagaatggtcccctctgccaccaacagtgtcgtaaacatctact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcaaagccaaagcaatagaatggtcccctctgccaccaacagtgtcgtaaacatctact 320
Query: 121 tcatactgcttctaaacacaccacatccccctcaaatggaataattggcattccatttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatactgcttctaaacacaccacatccccctcaaatggaataattggcattccatttat 380
Query: 181 aggggtggagaggagatgggggagcaaaagcccgtttcggggagctgggaacattgcaac 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 aggggtggagaggagatgggggagcaaaagcccgttttggggagctgggaacattgcaac 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
