Query= MSMg01no164_p03.b1 MSMg01no164_p03.b1 CHROMAT_FILE:
MSMg01no164_p03.b1 PHD_FILE: MSMg01no164_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:56 2005
(625 letters)
>mm_chr9_94807782_94808805
Length = 1024
Score = 1170 bits (605), Expect = 0.0
Identities = 617/621 (99%), Gaps = 1/621 (0%)
Strand = Plus / Plus
Query: 5 gaattccattaacaataatcagacctcatcatccacatctattagacaacgtgattctaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccattaacaataatcagacctcatcatccacatctattagacaacgtgattctaa 264
Query: 65 gaaccatcggagaaaaataagggggactcgtgttatagctccctcttcacaaatgggcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaccatcggagaaaaataagggggactcgtgttatagctccctcttcacaaatgggcca 324
Query: 125 aaggaaagggtcacatataaagccatggcataggcactatagatcacactaagacctgtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaggaaagggtcacatataaagccatggcataggcactatagatcacactaagacctgtc 384
Query: 185 agtcattgtacctagagaatccaacagcttgttcagcacacagctgcaccctaagaggca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtcattgtacctagagaatccaacagcttgttcagcacacagctgcaccctaagaggca 444
Query: 245 ctgcctaaccaaacagattgaaacctgcccttccctcttcttcgtgatcctaatgcatgt 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgcctaaccaaacagattgaaacctgcccttccctcttcttcgtgatcctaatgcatgc 504
Query: 305 actgtaatagaaataaaagccaagatcccatattaaaaatgcagggagcagtgcacaatt 364
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 505 actgtaatagaaa-aaaagccaagatcccatattaaaaatgcagggagcactgcacaatt 563
Query: 365 ttcttccccatctctaaactccggaaacagaggtctatccacttggatctataaagctta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttcttccccatctctaaactccggaaacagaggtctatccacttggatctataaagctta 623
Query: 425 tgtgataaaatatggctgtgccttgtctcgtctttgaaatcacaaacctcttgagcaaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtgataaaatatggctgtgccttgtctcgtctttgaaatcacaaacctcttgagcaaag 683
Query: 485 gggccatattttatctcctagacatctaccaacccaggtccggctctgaactcatactaa 544
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 684 gggccatattttatctcctagacatctaccaacccaggcccggctctgaactcatactaa 743
Query: 545 ctgaggcttagggcctctttgttcctcaaatcaaatgcaaccaattctctctagtacaca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctgaggcttagggcctctttgttcctcaaatcaaatgcaaccaattctctctagtacaca 803
Query: 605 taattgaaagcagcagtctat 625
|||||||||||||||||||||
Sbjct: 804 taattgaaagcagcagtctat 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1024
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1014
Effective search space: 623610
Effective search space used: 623610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_p03.g1 MSMg01no164_p03.g1 CHROMAT_FILE:
MSMg01no164_p03.g1 PHD_FILE: MSMg01no164_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:56 2005
(282 letters)
>mm_chr9_94971656_94972337
Length = 682
Score = 426 bits (220), Expect = e-123
Identities = 258/274 (94%), Gaps = 8/274 (2%)
Strand = Plus / Minus
Query: 1 caggctggtgagagatacagtctcaaaaagtaaaacaaaacagcaacgcacgcatatgta 60
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 610 caggctgatgagagatacagtctcaaaaagtaaaacaaaacagcaacgtacgcatatgta 551
Query: 61 catatacaagcaaacacacacacacacacacacacac--acagagagagagagagagaga 118
||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 550 catatacgagcaaacacacacacacacacacacacacatacacagagagagagaga---- 495
Query: 119 gagagagagagagagagagagagaacaatttctgcatgttttcctttccctgaaactccc 178
| |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 494 -a-agagagggagagagagagagaacaatttttgcatgttttcttttccctgaaactccc 437
Query: 179 aatccctaacctacttgtgcagacctgtgaggggctgcttccgatggggacttacttatt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aatccctaacctacttgtgcagacctgtgaggggctgcttccgatggggacttacttatt 377
Query: 239 tacagagagttcttttaaaacggtctttgctcat 272
|||||||||||||||||||||| |||||||||||
Sbjct: 376 tacagagagttcttttaaaacgttctttgctcat 343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
