Query= MSMg01no167_f08.b1 MSMg01no167_f08.b1 CHROMAT_FILE:
MSMg01no167_f08.b1 PHD_FILE: MSMg01no167_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:04 2005
(642 letters)
>mm_chr9_96388068_96389109
Length = 1042
Score = 949 bits (491), Expect = 0.0
Identities = 551/577 (95%), Gaps = 12/577 (2%)
Strand = Plus / Plus
Query: 7 gaattctatccca--ttcggttcctgttagaccttctgtgtttgtattcctctgttttgt 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctatcccaggt--ggttcctgttagaccttctgtgtttgtattcctctgttttgt 264
Query: 65 gtaagaatccagtaacctctttgtacctagctggtgtgtcacccagcttccttattgtct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtaagaatccagtaacctctttgtacctagctggtgtgtcacccagcttccttattgtct 324
Query: 125 tctgtataaaaggtttgatgctcgacttgacaaattacattcagattctacacaacctct 184
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgtataaaaggtttgatgctcgatttgacaaattacattcagattctacacaacctct 384
Query: 185 cctgtgtgcatctgtctgtcattccatcccactctttgcccacctgccccagagacccgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctgtgtgcatctgtctgtcattccatcccactctttgcccacctgccccagagacccgt 444
Query: 245 tccacgcagacaaagggatccagagggtctgcggtacccctgaaaacactgtatcataaa 304
||||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||
Sbjct: 445 tccacgcagacaaagggatacagagggtctgcggcatccctgaaaacaccgtatcataaa 504
Query: 305 aggacaaagacctttgagagatgatcaaggtagcacatctgaatatgtctggtcttactt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aggacaaagacctttgagagatgatcaaggtagcacatctgaatatgtctggtcttactt 564
Query: 365 atttattcatttatgtatctctacatgtacatattcaagtggtctgggtgtacatgtgtg 424
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 565 atttattcatttatttatctctacatgtacatattcaagtggtctgggtgtacatgtgcg 624
Query: 425 catatatgtcagctgtaattccccgggatctatctaccttgatgagtttttaagttcttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 625 tatatatgtcagctgtaattccccgggatctatctaccttgatgagtttttaggttctct 684
Query: 485 gagatttcattcagtacattttgatcatatccattccttcccccaactcctttcagattt 544
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 685 gagatttcgttcagtacattttgatcatatccattccttcccccaactcctttcaggtcc 744
Query: 545 attcttcttccctat--------gggaacccgtttct 573
||||||||||||||| ||||||||||||||
Sbjct: 745 attcttcttccctatccacttatgggaacccgtttct 781
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_f08.g1 MSMg01no167_f08.g1 CHROMAT_FILE:
MSMg01no167_f08.g1 PHD_FILE: MSMg01no167_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:04 2005
(484 letters)
>mm_chr9_96490070_96490953
Length = 884
Score = 640 bits (331), Expect = 0.0
Identities = 349/355 (98%)
Strand = Plus / Minus
Query: 126 tggcttagtttttatttatgtatattgtgtgcttgtgtgcgtgtatgccatacatgtata 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 tggcttagtttttatttatgtatattgtgtgcttgtgtgcgtgtatgccatacatgtata 825
Query: 186 agtccttacagaggccagaggtgttggatctcctgaagttggagtcataggctgttggga 245
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 824 agtccttacagaggccagagatgttggatctcctgaagttggagtcataggctgttggga 765
Query: 246 gctacctgatttgagtacttggaacttacctggggtcctctggaagggtacccagggccc 305
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 764 gctacctgatttgagtacttggaacttacctggggtcctctggaagggtatccagggccc 705
Query: 306 ttacctgctgagcatttctccagcttcctgttgttatacctcaggatgtagaatattagc 365
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 704 ttacctgctgagcatttctccagcttcctgttgttatattttaggatgtagaatattagc 645
Query: 366 atgatttcaaaggaaaaattgtatcagaaggcattattcatcgatgtggttcagttccct 425
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 644 atgatttcaaaggaaaaattgtatcagaaggcattattcatcggtgtggttcagttccct 585
Query: 426 cttcctcacactcagccctaggcaaccacagtctgatttctgtgtctgtttttac 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cttcctcacactcagccctaggcaaccacagtctgatttctgtgtctgtttttac 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
