Query= MSMg01no171_f07.b1 MSMg01no171_f07.b1 CHROMAT_FILE:
MSMg01no171_f07.b1 PHD_FILE: MSMg01no171_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:31 2005
(335 letters)
>mm_chr9_26945534_26946265
Length = 732
Score = 540 bits (279), Expect = e-158
Identities = 318/333 (95%), Gaps = 7/333 (2%)
Strand = Plus / Plus
Query: 5 gaattccacaatgctttgctttaacgcccttgcatgtggcgcgttatgtctttgagtggt 64
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattccacaatgctctgctttaacgcccttgcacgtggcgcgttatgtctttgagtggt 264
Query: 65 gaactttgatgggctaggagttttcttttctctcattcttcccccgcccca-aaatgtcc 123
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 265 gaactttgatgggctaggagttttcttttctctcattcttcc----ccccacaaatgtcc 320
Query: 124 ttcacccaaaaactacaacacaataacctcagaatatgaaacatatgggaaaagttatga 183
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcacccaaaaactataacacaataacctcagaatatgaaacatatgggaaaagttatg- 379
Query: 184 ggaaaaaa-taaaacaactaaaattccaaggtataaacaccacagaacatggaggccagt 242
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 380 ggaaaaaaataaaacaactaaaattccaaggtataaacaccgcagaacatggaggccagt 439
Query: 243 ctagtaatgtaccctttcagccgtggactccactatcatttgtttaagacagtcttgcta 302
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 440 ctagttatgtaccctttcagccgtggactccgctatcatttgtttaagacagtcttgcta 499
Query: 303 agccattctggaactcatattcctcctgcctca 335
|||||| |||||||||||| |||||||||||||
Sbjct: 500 agccatcctggaactcataatcctcctgcctca 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 732
Length adjustment: 9
Effective length of query: 326
Effective length of database: 723
Effective search space: 235698
Effective search space used: 235698
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_f07.g1 MSMg01no171_f07.g1 CHROMAT_FILE:
MSMg01no171_f07.g1 PHD_FILE: MSMg01no171_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:31 2005
(294 letters)
>mm_chr9_26969396_26970089
Length = 694
Score = 551 bits (285), Expect = e-161
Identities = 291/293 (99%)
Strand = Plus / Minus
Query: 1 gatagctggccaaatttatattgtcacaattttaccttctgtagaggcacaactagtagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gatagctggccaaatttatattgtcacaattttaccttctgtagaggcacaactagtagt 434
Query: 61 atctactgttatctgtctgtcctttagctttgtggccactaaagggtcttgagctgcttt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 433 atctactgttatctgtctgtcctttagctttgtggccactaaagggtcttgagctgtttt 374
Query: 121 tctgattaatttttgtattcttggttgggaccctagcttttaatagctgaaccatttctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tctgattaatttttgtattcttggttgggaccctagcttttaatagctgaaccatttctc 314
Query: 181 cagacttctgattcatttttaactaggcagtgacaagagattcaaggatttttagggtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cagacttctgattcatttttaactaggcagtgacaagagattcaaggatttttagggtct 254
Query: 241 ttttggtgtaatattagtattacaaggttttaagctgcctcctattcctctat 293
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 253 ttttggtgtaatattagtattacaaggttttaagctgtctcctattcctctat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
