Query= MSMg01no173_i18.b1 MSMg01no173_i18.b1 CHROMAT_FILE:
MSMg01no173_i18.b1 PHD_FILE: MSMg01no173_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:15 2005
(234 letters)
>mm_chr9_110986995_110987628
Length = 634
Score = 275 bits (142), Expect = 2e-78
Identities = 166/174 (95%), Gaps = 3/174 (1%)
Strand = Plus / Minus
Query: 58 ctctccctctcctttcctcca-aaaagaggttccccctccatgggcaccaacctccctcg 116
|||| |||||||| |||| || ||||||| ||||||||||||||| |||||||||||||
Sbjct: 491 ctct-cctctcctctcct-cagaaaagagcttccccctccatgggtaccaacctccctca 434
Query: 117 gtaatagactttacagttttatttgtgtcttattataccttggaacaattttgttgcaaa 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtaatagactttacagttttatttgtgtcttattataccttggaacaattttgttgcaaa 374
Query: 177 tgttataaaatctctcattttgtttctgataataaaacatataaacacacttct 230
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttttataaaatctctcattttgtttctgataataaaacatataaacacacttct 320
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no173_i18.g1 MSMg01no173_i18.g1 CHROMAT_FILE:
MSMg01no173_i18.g1 PHD_FILE: MSMg01no173_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:15 2005
(234 letters)
>mm_chr9_110886162_110886795
Length = 634
Score = 435 bits (225), Expect = e-126
Identities = 228/229 (99%)
Strand = Plus / Plus
Query: 6 aaaccaaaacaaaacaaaaaaacctgtttcaaattgatgattagtcctaaacaaatgact 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aaaccaaaacaaaacaaaaaaacctgtttcaaattgatgattagtcctaaacaaatgact 265
Query: 66 aagattgtatttcatactcaagtacaggctttatatcaagatttgaaaactaaaatgtga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aagattgtatttcatactcaagtacaggctttatatcaagatttgaaaactaaaatgtga 325
Query: 126 aaagatggaagggtagaatttcatacaaatggacttcttaatttatgtaaattctatttt 185
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 326 aaagatggaagggtagaatttcatacaaatggacttcttaatgtatgtaaattctatttt 385
Query: 186 aataaaaccagcctttgcgtaaaagccttgttccacgtgtgttcctgtg 234
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aataaaaccagcctttgcgtaaaagccttgttccacgtgtgttcctgtg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
