Query= MSMg01no184_k01.b1 MSMg01no184_k01.b1 CHROMAT_FILE:
MSMg01no184_k01.b1 PHD_FILE: MSMg01no184_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:04 2005
(365 letters)
>mm_chr9_7423457_7424221
Length = 765
Score = 679 bits (351), Expect = 0.0
Identities = 351/351 (100%)
Strand = Plus / Plus
Query: 15 ggaattctttataactggttctgctgtgaatgtgacagcaggtctcttaggcaaatagct 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ggaattctttataactggttctgctgtgaatgtgacagcaggtctcttaggcaaatagct 274
Query: 75 cttctgagaattcttttctggttaagtagtatgtgtcttctccacttagttccctgacct 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cttctgagaattcttttctggttaagtagtatgtgtcttctccacttagttccctgacct 334
Query: 135 ctgacatatgaagcctcctgtttttggtcagtgggagtcttcagtttctaacagactatt 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctgacatatgaagcctcctgtttttggtcagtgggagtcttcagtttctaacagactatt 394
Query: 195 agctgtgtgaccagtgtaaccttccccatgtgagaatttattttaaaagattatagtggg 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 agctgtgtgaccagtgtaaccttccccatgtgagaatttattttaaaagattatagtggg 454
Query: 255 gggaggtgtctaagctcccttctgttgatgtgacagacatcagaaccaaaaacaacttgt 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gggaggtgtctaagctcccttctgttgatgtgacagacatcagaaccaaaaacaacttgt 514
Query: 315 tgaggaaatttggctaatatggcccaggatcacagtccataactgagagaa 365
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tgaggaaatttggctaatatggcccaggatcacagtccataactgagagaa 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_k01.g1 MSMg01no184_k01.g1 CHROMAT_FILE:
MSMg01no184_k01.g1 PHD_FILE: MSMg01no184_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:04 2005
(287 letters)
>mm_chr9_7577974_7578660
Length = 687
Score = 547 bits (283), Expect = e-160
Identities = 286/287 (99%)
Strand = Plus / Minus
Query: 1 tctagcactattgtcagcctgtgggtgctgggaattgaacccaggtcctctggaagagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tctagcactattgtcagcctgtgggtgctgggaattgaacccaggtcctctggaagagca 518
Query: 61 gccagtgctcgtgattgctgatcagctctcagcttttatagtttttaatcacaaaaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gccagtgctcgtgattgctgatcagctctcagcttttatagtttttaatcacaaaaattc 458
Query: 121 attttagtgagtttggggtgctagaaatcatcacagccatagagagaaacaattctcatt 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 attttagtgagtttgggatgctagaaatcatcacagccatagagagaaacaattctcatt 398
Query: 181 gtcatttatgaggagaacctaaattaggagagaagcccttcacaaaactcatgattaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gtcatttatgaggagaacctaaattaggagagaagcccttcacaaaactcatgattaaga 338
Query: 241 ttgtattttgcagaaatacccattgctcttttagaaaagaggagaaa 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttgtattttgcagaaatacccattgctcttttagaaaagaggagaaa 291
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
