Query= MSMg01no185_p15.b1 MSMg01no185_p15.b1 CHROMAT_FILE:
MSMg01no185_p15.b1 PHD_FILE: MSMg01no185_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:49 2005
(368 letters)
>mm_chr9_22591409_22592176
Length = 768
Score = 652 bits (337), Expect = 0.0
Identities = 358/369 (97%), Gaps = 8/369 (2%)
Strand = Plus / Plus
Query: 4 ggaattctacaggagcctccctgttagagatgctacagaatggagtccattcattgtcct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctacaggagcctccctgttagagatgctacagaatggagtccattcattgtcct 263
Query: 64 ctacatgtattctacc----gcagcactaaaagtggctaagaattatgttcttgctcggt 119
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctacatgta----acctaatgcagcactaaaagtggctaagaattatgttcttgctcggt 319
Query: 120 gtgtggtgagctcctatcatcccagctctcgggaggcagaagctgacggatctctgagtt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtgtggtgagctcctatcatcccagctctcgggaggcagaagctgacggatctctgagtt 379
Query: 180 cagtgccagcctgctctacattgctgagttccaggacagccagagctatagagagagact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagtgccagcctgctctacattgctgagttccaggacagccagagctatagagagagact 439
Query: 240 gtctcaaacaaaccaacaatagcaagaaaaattagatccttgctatgccttcataataaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtctcaaacaaaccaacaatagcaagaaaaattagatccttgctatgccttcataataaa 499
Query: 300 actcccagggctggctttagtctgtgcagcagctcaaagagtaatggatgcatataggca 359
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |
Sbjct: 500 actcccagggctggctttagtctgtgcaggagttcaaagagtaatggatgcatataggta 559
Query: 360 atagattca 368
|||||||||
Sbjct: 560 atagattca 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_p15.g1 MSMg01no185_p15.g1 CHROMAT_FILE:
MSMg01no185_p15.g1 PHD_FILE: MSMg01no185_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:49 2005
(291 letters)
>mm_chr9_22751737_22752427
Length = 691
Score = 547 bits (283), Expect = e-160
Identities = 289/291 (99%)
Strand = Plus / Minus
Query: 1 aaaagcacattaaaagccccacctcagcactgctgaagtcacaagagagcctgacctaat 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 491 aaaagcacattaaaagccccacctcagcactgctgaagtcacaagagagggtgacctaat 432
Query: 61 tgggacattcatgatatcctttaaagcttacctgggtctcagtcctctgatgaaaatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgggacattcatgatatcctttaaagcttacctgggtctcagtcctctgatgaaaatttt 372
Query: 121 gtaaacttgtaaggtttctgaattgtccaaacttcattagattaaaagcatcttgatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gtaaacttgtaaggtttctgaattgtccaaacttcattagattaaaagcatcttgatcct 312
Query: 181 tcaggggataaagcagcagcaacagagctcatctatgactgggcacaacttcaaacctcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tcaggggataaagcagcagcaacagagctcatctatgactgggcacaacttcaaacctcg 252
Query: 241 gagatcgctttccacgcaaagggtctgagccccactggctctggtgtggag 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gagatcgctttccacgcaaagggtctgagccccactggctctggtgtggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
