Query= MSMg01no186_p08.b1 MSMg01no186_p08.b1 CHROMAT_FILE:
MSMg01no186_p08.b1 PHD_FILE: MSMg01no186_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:07 2005
(579 letters)
>mm_chr9_10670132_10671111
Length = 980
Score = 1054 bits (545), Expect = 0.0
Identities = 569/577 (98%), Gaps = 1/577 (0%)
Strand = Plus / Plus
Query: 4 ggaattccaggtcccagggaggatgcttgtatgttatgaaaatgataaattaagacagaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaggtcccagggaggatgcttgtatgttatgaaaatgataaattaagacagaa 263
Query: 64 a-tatccctgctagtgagcttctgatctagatatattaactttttctaacatcaagaaaa 122
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 264 aatatccctgctagtgagcttctgatctagatatattaactctttctaacatcaagaaaa 323
Query: 123 tatgtcttattattaccaccttattttaaacaataatgtttgaataaaatttgttttaat 182
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 324 tatgtcttattattaccaccttattttaagcaataatgtttgaataaaatttgttttaat 383
Query: 183 aagggctttaaagagaatgtagttttcatgctaagtgtgagacttgacaggcacagagac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagggctttaaagagaatgtagttttcatgctaagtgtgagacttgacaggcacagagac 443
Query: 243 ttgtattcttataatcattttcagataatgaaacttagtaatagcatcactctaatcaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgtattcttataatcattttcagataatgaaacttagtaatagcatcactctaatcaaa 503
Query: 303 gccagagtcacattaaagctttacctataaccctcggtgattatacagcttgacaaatgc 362
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 504 accagagtcacattaaagctctagctataaccctcggtgattatacagcttgacaaatgc 563
Query: 363 ctgccaagtaaattatgtatcttgaaattgacatgcaaaagctagagatgccacctcatc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctgccaagtaaattatgtatcttgaaattgacatgcaaaagctagagatgccacctcatc 623
Query: 423 agaaagctcaagatggaatcaagtgcagggatagcagcctgatctaaagaacttgctgga 482
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 624 agaaagctcaagatggaatcaagtgcaggggtagcagcctgatctaaagaacttgctgga 683
Query: 483 aagggattaaatcaatgcattctttccacagatgcacatcatgatgaaatgacactattt 542
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagggattaaatcactgcattctttccacagatgcacatcatgatgaaatgacactattt 743
Query: 543 tcaaacccacaatagcatttacacattcaagaaaaat 579
|||||||||||||||||||||||||||||||||||||
Sbjct: 744 tcaaacccacaatagcatttacacattcaagaaaaat 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 980
Length adjustment: 10
Effective length of query: 569
Effective length of database: 970
Effective search space: 551930
Effective search space used: 551930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_p08.g1 MSMg01no186_p08.g1 CHROMAT_FILE:
MSMg01no186_p08.g1 PHD_FILE: MSMg01no186_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:07 2005
(339 letters)
>mm_chr9_10805870_10806608
Length = 739
Score = 630 bits (326), Expect = 0.0
Identities = 335/338 (99%)
Strand = Plus / Minus
Query: 1 caggacagtcaggactatacagagaaactctgtcttgaaaaaaccaaaaaataaaaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 caggacagtcaggactatacagagaaactctgtcttgaaaaaaccaaaaaataaaaataa 563
Query: 61 aataaaataaataaaacacaataattaaaaatagtagcataactaaataaaattaatgca 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 562 aataaaataaataaaacacaataattaaaaatagtagcataaccaaataaaattaatgca 503
Query: 121 gtctgaaagtgatgttaccaaaccaccatagcatacctgtgactgcaatattccaaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtctgaaagtgatgttaccaaaccaccatagcatacctgtgactgcaatattccaaatgc 443
Query: 181 ctgtatattcaaaactatcttatgcttgattaagccattcttttaggatcctgttattta 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 442 ctgtatattcaaaactatcttatgcttgattaagtcattcttttaggatcctgttattta 383
Query: 241 cagacaaatattctgagatcctattttactacatagggagttaagtaccactataagtgg 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 382 cagacaaatattctgagatcctatcttactacatagggagttaagtaccactataagtgg 323
Query: 301 tatagaagagtttgaatgttggaatgtttcgaatatga 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tatagaagagtttgaatgttggaatgtttcgaatatga 285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
