CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGCTTCCTATTCCCTGCTTCTCAACCACAAGAGGGAGTATATTCCT
CAAACTAAAAAAAAAAAAAACAAAAAAAAAAAAACAAAACTCAGCCTCTT
AAGCTGTTCTTATTATACATTCTGTCCCTTTGTCCCAGCAATGAGAGTAG
TAACTAGTACATGTCTATTCGGTGCCTTCATATTGTAGCTACACTCTCAT
GGGCATCTTTGTATCCCTACACATGTTTGACATATGTGTACCAGAACATT
GTTGTATGCAAACAATAACATAATAATGTATATTACTGTCTCTGTAATCA
TCTGAATCATCTTGGACAAATGACCTTCACTATATTTAGATCATGTCATT
TCTTCTACCAGCTTTTATTTTCTCACATTGACTTTACTATTCATTTTTAT
ACTCTTTTCTCTCCCTCCCCCTTGACTTTGACTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTGTGTGAGTGTGTGTGTGTGTGAGTG
AGAAACACAATCATCATACTTTTTCCCAATATATTCTACCCACTCCACTA
CCCCTATCCTATACACACCCCCCTTTTATATTTTCTTTTCCACCTTCTCT
AATATCATACTATATTTTTATAGTTATCTTCAATATTTTCACAA

TTTTATCCCTTTTTTTTTTACACCTTTCTCTTATTCCCCAAAANTCTCTA
TGCTATGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAATTCTTATGGATCTCTTGCACTGGCAA
GCTTTTGCTGGTTCTGTATCGAACGCAGACGAGTCTTTGCGATTGTGCAG
ACCTCCATTGCCCTGAGTGCAGCCTACTTGTTCCTATGAAAATGGCCTGT
ACAAAGATACGTTGCAAGACCGATGTACCAAATATCTTCCTTGAATATAC
CTATGACCTGTAGACTCCTTGTTTCGATTTCCCCCCCCATTCAATATTAC
CCGTTATATACTACTCACATATTGTCTAGCTCCAAACCACTGTAACATTA
AAAAAAGAAGATTTGTTTTATTTCACCCCCCCCCCCCCCCTTTCTTTAAT
GACTATGCCCTGATTCTTTTCTCCTTTTTACATCAATAAAAAAAAATATT
ATATGTAGGGCCTTCTCTCTTATTATAGTTAATCTCCTAATACGAGCCTT
GCATCCCCCCAATGAATTACATCCTCTCCTTAATTTCCCCCCTTTCCCCC
CCATATTGTGTCACATCGCCCCCATCTAATTCGTCACATTGCACCTCACC
CCACCCCACCATAACGTTACCGCTTATATTCTTCTGACGTTGCCCCTCCT
CTCCTGTACCACCCCTTTCTTCCTTTGTTTCTGGACCTAATATCTTCCTC
TTTGCGCATTACTTCTTATACCCAATATATGTATTATTCTCCCAACGTCT
ACTTATTTACTCTACAACATCTACACCCCTCCGCATATTTTACTATTCCG
CCGATATATAACCATCCCACGCCTTCTTTTCCCTATAATCCGCACCCACA
TTTAATATATCTTCATGN

Query= MSMg01no190_j15.b1 MSMg01no190_j15.b1 CHROMAT_FILE:
MSMg01no190_j15.b1 PHD_FILE: MSMg01no190_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:55 2005
         (503 letters)



>mm_chr9_17503016_17503916
          Length = 901

 Score =  775 bits (401), Expect = 0.0
 Identities = 452/477 (94%), Gaps = 15/477 (3%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgcttcctattccctgcttctcaaccacaagagggagtatattcctcaaactaa 64
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 713 gaattctgcctcctattccctgcttctcaaccacaagagggagtatattcctcaaact-- 656

                                                                       
Query: 65  aaaaaaaaaaaacaaaaaaaaaaaaacaaaactcagcctcttaagctgttcttattatac 124
               | |||||||       ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 655 ----ataaaaaac-------aaaaaacaaaactcagcctcttaagctgttcttatcatac 607

                                                                       
Query: 125 attctgtccctttgtcccagcaatgagagtagtaactagtacatgtctattcggtgcctt 184
           |||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||
Sbjct: 606 attctgtccctttgtcccagcaatgagagtagtggctagtacatgtccattcggtacctt 547

                                                                       
Query: 185 catattgtagctacactctcatgggcatctttgtatccctacacatgtttgacatatgtg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 catattgtagctacactctcatgggcatctttgtatccctacacatgtttgacatatgtg 487

                                                                       
Query: 245 taccagaacattgttgtatgcaaacaataacataataatgtatattactgtctctgtaat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 taccagaacattgttgtatgcaaacaataacataataatgtatattactgtctctgtaat 427

                                                                       
Query: 305 catctgaatcatcttggacaaatgaccttcactatatttagatcatgtcatttcttctac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 426 catctgaatcatcttggacaaatgaccttcactatatttagatcatgtcctttcttctac 367

                                                                       
Query: 365 cagcttttattttctcacattgactttactattcatttttatactcttttctctccctcc 424
           |||||||||||||||||  |||||||||||||||||| |||| |||||||||||||||||
Sbjct: 366 cagcttttattttctca--ttgactttactattcattgttatgctcttttctctccctcc 309

                                                                    
Query: 425 cccttgactttgactctctctctctctctctctctctctctctctctctctctctct 481
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cccttgactttgactctctctctctctctctctctctctctctctctctctctctct 252


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 901
Length adjustment: 10
Effective length of query: 493
Effective length of database: 891
Effective search space:   439263
Effective search space used:   439263
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)