Query= MSMg01no195_i10.b1 MSMg01no195_i10.b1 CHROMAT_FILE:
MSMg01no195_i10.b1 PHD_FILE: MSMg01no195_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:47 2005
(467 letters)
>mm_chr9_27724515_27725377
Length = 863
Score = 812 bits (420), Expect = 0.0
Identities = 450/462 (97%), Gaps = 6/462 (1%)
Strand = Plus / Minus
Query: 5 gaattctgtgaggcccgtatcaggaagtgagagagacagaacagattacacacagggagg 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gaattctgtgaggtcagtatcaggaagtgagagagacagaacagattacacacagggagg 444
Query: 65 tgtggctggggcattaaaaaaagctttgacagacctccaaaatgggcagaaaaggtggat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 443 tgtggctggggcattaaaaaaagctttgacagacctccaaaatgggcagaaaagggggat 384
Query: 125 ggtgtggaaatgaaggtggaaatgaacaggaatttaccagagattaaagattctgtgggc 184
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggtgt-ga---gaaggtggaaatgaacaggaatttaccagagattaaagattctgtgggc 328
Query: 185 taccagttgactttgctttacaacaccatccccaaatcccagcctctcaggggctctcct 244
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 327 taccagttgactttgctttacaacatcatccccaaatcccagcctctcaggggctctcct 268
Query: 245 aaagactcctttgcacagacttggggttcatgcaactcatcagcctgcattgttatattt 304
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 267 aaagactcctttgcacagacttggggttcatgcaactcattagcctgcattgttatattt 208
Query: 305 ttt--cctttggtttccatgacaaatattgtacattggcatttaagtgatagtaatatac 362
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tttttcctttggtttccatgacaaatattgtacattggcatttaagtgatagtaatatac 148
Query: 363 tcttttatacttctagaaaagtccaagataaagatatcagccatatgagcccttctgagt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tcttttatacttctagaaaagtccaagataaagatatcagccatatgagcccttctgagt 88
Query: 423 ccctgtccttggcttacatgtgacgtcctgcctgttacccac 464
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 87 ccctgtccttggcttacatgtgacttcctgcctgttacccac 46
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 863
Length adjustment: 10
Effective length of query: 457
Effective length of database: 853
Effective search space: 389821
Effective search space used: 389821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_i10.g1 MSMg01no195_i10.g1 CHROMAT_FILE:
MSMg01no195_i10.g1 PHD_FILE: MSMg01no195_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:47 2005
(396 letters)
>mm_chr9_27620336_27621131
Length = 796
Score = 766 bits (396), Expect = 0.0
Identities = 396/396 (100%)
Strand = Plus / Plus
Query: 1 tttgtttagatctgtactccatttttaatagggttatttggttttctggagtctgctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtttagatctgtactccatttttaatagggttatttggttttctggagtctgctgct 260
Query: 61 gtgttcttaacaacaataacttaaaaagctaaaccaataatcttgtgatatagctcactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgttcttaacaacaataacttaaaaagctaaaccaataatcttgtgatatagctcactg 320
Query: 121 attagaatctttttttgaaccattataaatgtcacatttggtttaggtaaaagctccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attagaatctttttttgaaccattataaatgtcacatttggtttaggtaaaagctccttc 380
Query: 181 cttgggtaacaatgtagacagtgactcatttctcaaggtcataatgggacatgaatggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgggtaacaatgtagacagtgactcatttctcaaggtcataatgggacatgaatggac 440
Query: 241 tatgaatttactgtctgcccagcctcagaggtttagagcagcaagatgactaggaaaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgaatttactgtctgcccagcctcagaggtttagagcagcaagatgactaggaaaagc 500
Query: 301 catcttgtaagaccttcattggaaagccagtcctggaagcatgttactaacccagggtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catcttgtaagaccttcattggaaagccagtcctggaagcatgttactaacccagggtgt 560
Query: 361 gggttccaactcttgcataagcagtctcatgatgaa 396
||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggttccaactcttgcataagcagtctcatgatgaa 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
