TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTTCCTGCCGATCAGACTGTCAATCCAGTCTGAAGGTATTTGGTT
ACCCCCTCCCACATAAGCTCTGTACTATTATTTTACCAGTGGTCAATAAC
TTTATTTTATTTTATTCTATTTTTGAGACAGGATCTCACTATGTAGCCCT
GGCTGGCCTGGAATTCACTATGTAGATCAGGCTGGCTTTGAACTTTGAAC
TTCGATTCACCTGCCTCTTCTTCTTGAGTGCTGGGATTAAATATGTGTCT
CAGTATGCCTAGCTAACTTTACATTTGCTATTTCTGTCCTCTTCCCTCTC
CTCTGCTGAGTCCAGCTTGTCCATGTCAGGCACCGTATGATAGCTTGTAC
CCTTGATTTGATTTTCCCCCCCCCCGGGGGGAAAAAGATTTNTTCTCTTT
TCCTGATACCCCTTCACCTACTGAATTTGTTCCTTTGCTCCCTCTTACTT
CCTTACTTTCTCCCATTTAATCCCTACATCCCCATTCCTCCTCCCTTTCT
TTCTACCCTCTCATTTTTTCTTTTAAGTTCTCTCTCGTTTCTAGTTTCTA
CTACCTTTTTCCTTTCTCTTCGTGTCCACTCACCCCTTTTTTCCAACTCT
ACATTCTTTTCCTTTTATCTACTCTATTCCCTTTTTCTCACTCCCTTCCC
TCCCTCTCCATTTCCTTCCAATCACTAATTCTTTCTCTGTTTTTTATCAC
CCTCTGCTCCTCTACCGC

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCATACAAACCTCGAGCAATGGGACA
TGATTATTACAGACACGTATCTCTGAGCGAAGAGTAAACAGGATATGGAG
TAAAATAACCAAAACCCATCCCCTTCCAGCCATCCTGTTTCTCCATCTAA
TCACTCACAGAGCAAACAGACAGTGAGCATCTAACACATGCAAAACTAAG
GATACATCAGTGAACAAGAAGGGTAGTGGGAAGACATGGTGGTGCTGATG
TTGGTAAAAGCAGAAAGCAATTGATAATGACGACACTATAACAATTAAAC
AAGGCAGAACCCTGCAGTGAGGGAAAAATCCACTCAGAAAATAACTCACT
ACTGTGGCAATAAGATTTAACAACCTCTCTATATCCCCCTCACATCTCTA
AATCCTGCCAAGGTGCCCCTTTCCAACACTAAGAAGACAGTGATGTTTTT
GTCTAGATCAGTGGTTCCCAACCTGTGGGCTGCCATGCCTTTGAAGGTCA
AAAGGCCCTTTCTTAGGGGTCACATATCAGATATCCTGCATATCATGTAT
TTACATTATAAGTCATAACAGAAGCAATATTACATTTATGAAGTATCAAC
GAAAAAAATGTTATAATTGGGGTCATCACATCCTGAGGGAGCCTACTATA
AAGGCTCAACATCTGAAAGGTTGACAAGTTCTAATTTATGAAGCGTCATA
TTC

Query= MSMg01no204_a24.g1 MSMg01no204_a24.g1 CHROMAT_FILE:
MSMg01no204_a24.g1 PHD_FILE: MSMg01no204_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:28 2005
         (552 letters)



>mm_chr9_22440666_22441615
          Length = 950

 Score = 1036 bits (536), Expect = 0.0
 Identities = 548/552 (99%), Gaps = 2/552 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catacaaacctcgagcaatgggacatgattattacagacacgtatctctgagcgaagagt 60
           ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||
Sbjct: 631 catacaaacctcgagcaatgggacatgattattacagacacatatc-ctgag-gaagagt 574

                                                                       
Query: 61  aaacaggatatggagtaaaataaccaaaacccatccccttccagccatcctgtttctcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aaacaggatatggagtaaaataaccaaaacccatccccttccagccatcctgtttctcca 514

                                                                       
Query: 121 tctaatcactcacagagcaaacagacagtgagcatctaacacatgcaaaactaaggatac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tctaatcactcacagagcaaacagacagtgagcatctaacacatgcaaaactaaggatac 454

                                                                       
Query: 181 atcagtgaacaagaagggtagtgggaagacatggtggtgctgatgttggtaaaagcagaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atcagtgaacaagaagggtagtgggaagacatggtggtgctgatgttggtaaaagcagaa 394

                                                                       
Query: 241 agcaattgataatgacgacactataacaattaaacaaggcagaaccctgcagtgagggaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agcaattgataatgacgacactataacaattaaacaaggcagaaccctgcagtgagggaa 334

                                                                       
Query: 301 aaatccactcagaaaataactcactactgtggcaataagatttaacaacctctctatatc 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 333 aaatccactcagaaaataactcactactgtggcaataagatttaagaacctctctatatc 274

                                                                       
Query: 361 cccctcacatctctaaatcctgccaaggtgcccctttccaacactaagaagacagtgatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cccctcacatctctaaatcctgccaaggtgcccctttccaacactaagaagacagtgatg 214

                                                                       
Query: 421 tttttgtctagatcagtggttcccaacctgtgggctgccatgcctttgaaggtcaaaagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tttttgtctagatcagtggttcccaacctgtgggctgccatgcctttgaaggtcaaaagg 154

                                                                       
Query: 481 ccctttcttaggggtcacatatcagatatcctgcatatcatgtatttacattataagtca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ccctttcttaggggtcacatatcagatatcctgcatatcatgtatttacattataagtca 94

                       
Query: 541 taacagaagcaa 552
           ||||||||||||
Sbjct: 93  taacagaagcaa 82


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 950
Length adjustment: 10
Effective length of query: 542
Effective length of database: 940
Effective search space:   509480
Effective search space used:   509480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)