Query= MSMg01no204_p10.b1 MSMg01no204_p10.b1 CHROMAT_FILE:
MSMg01no204_p10.b1 PHD_FILE: MSMg01no204_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:42 2005
(368 letters)
>mm_chr9_29110629_29111396
Length = 768
Score = 526 bits (272), Expect = e-154
Identities = 323/364 (88%), Gaps = 37/364 (10%)
Strand = Plus / Plus
Query: 5 gaattctacattgactttatatgtccctcctttataaaacatctctctctctctctctct 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 242 gaattctacattgactttatatgtccctcctttatagaacatctctctctctctctctct 301
Query: 65 ctctctctctctctctctctctctctctctctctctctctctctctctctctttctctcc 124
|||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctctctctctctctctctctctctctctctctctctctc--------------------- 340
Query: 125 cctccccctctctctttttgcaatgtctccaacattggttaaccatgtgacctctctact 184
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ----------------tttgcaatgtctccaacattggttaaccatgtgacctctctact 384
Query: 185 attcatatttggctccacaggtcaaattattatctaaataactaattacatgtttcataa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attcatatttggctccacaggtcaaattattatctaaataactaattacatgtttcataa 444
Query: 245 acaccccgaagtacagtaatacccccatcaaactctcatgcgtgttctccaattctttcc 304
||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 acacccccaagtacagtaatacccccatcaaactctcatgcatgttctccaattctttcc 504
Query: 305 aaaacatcagctgagcaggaagtctgaaagccttttggagtccgccatcctatctccaca 364
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 505 aaaacatcagctgagcaggaagtctgaaagccttttggagtcctccatcctatctccaca 564
Query: 365 ccaa 368
||||
Sbjct: 565 ccaa 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 38
Number of successful extensions: 38
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no204_p10.g1 MSMg01no204_p10.g1 CHROMAT_FILE:
MSMg01no204_p10.g1 PHD_FILE: MSMg01no204_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:42 2005
(344 letters)
>mm_chr9_29140825_29141568
Length = 744
Score = 605 bits (313), Expect = e-177
Identities = 334/346 (96%), Gaps = 8/346 (2%)
Strand = Plus / Minus
Query: 1 ttatctagtgacatgtatgtaatggcaaaatgggttgaacgatggcagccaatatgtacc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 542 ttatctagtgacatgtatgtaatggcaaaatgggttgaacgatgtcagccaatatgtacc 483
Query: 61 --------taaaaagataaagtaagtgttggtgtagtgaatagtgagtgatcattttgat 112
||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 482 taaaaagataaaaagataaagcaagttttggtgtagtgaatagtgagtgatcattttgat 423
Query: 113 aaatactcccaacttatattgtcttaggagtgggttggttccataagatgtcatcaggac 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaatactcccaacttatattgtcttaggagtgggttggttccataagatgtcatcaggac 363
Query: 173 aagagcaggagttcttatttatgatggacccacacaagcattttatatatagtaatacta 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aagagcaggagttcttatttatgatggacccacacaagcattttatatatagtaatacta 303
Query: 233 taaaaatttactatgtaagcacctatgagtttaggttaaattcagtacttaataagttac 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 taaaaatttactatgtaagcacctatgagtttaggttaaattcagtacttaataagttac 243
Query: 293 tcaacactcagcactttgatatgaagtagggtttgtgntacatgac 338
||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 242 tcaacactcagcactttgatatgaagtagggtttgtgttacatgac 197
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
