Query= MSMg01no206_b10.b1 MSMg01no206_b10.b1 CHROMAT_FILE:
MSMg01no206_b10.b1 PHD_FILE: MSMg01no206_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:09 2005
(229 letters)
>mm_chr9_83021489_83022117
Length = 629
Score = 418 bits (216), Expect = e-121
Identities = 225/228 (98%)
Strand = Plus / Plus
Query: 1 ctcggtcacggaagggtcaaatagagaaacaggagacatgaatctacatggaaggcaggc 60
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 201 ctcggtcacggaagggtcaaatagaaaaacaggagaaatgaatctacatggaaggcaggc 260
Query: 61 aggtaagaaaaggaacgaaacgaagtgccctggtaaatgtaattagcacgcacagataat 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 aggtaagaaaaggaacgaaacgaagtaccctggtaaatgtaattagcacgcacagataat 320
Query: 121 acgacccgttatttgttttgttttaaaagtcttaacagaaatctgggaccactgccaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgacccgttatttgttttgttttaaaagtcttaacagaaatctgggaccactgccaacc 380
Query: 181 tatattacgttacatatagggcatgtaattttagattttctggaagcc 228
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatattacgttacatatagggcatgtaattttagattttctggaagcc 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no206_b10.g1 MSMg01no206_b10.g1 CHROMAT_FILE:
MSMg01no206_b10.g1 PHD_FILE: MSMg01no206_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:09 2005
(229 letters)
>mm_chr9_83163417_83164046
Length = 630
Score = 429 bits (222), Expect = e-125
Identities = 228/230 (99%), Gaps = 1/230 (0%)
Strand = Plus / Minus
Query: 1 cttagtgtgtggctggcatcatttcttttggataaagaagtttaatcttttaaatttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cttagtgtgtggctggcatcatttcttttggataaagaagtttaatcttttaaatttctt 371
Query: 61 caaggatacaag-aaaaaaataattcttttaatgcaaaacacagactacaaactgaatcc 119
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 370 caaggatacaagaaaaaaaataattctttttatgcaaaacacagactacaaactgaatcc 311
Query: 120 tatgagttaactggttcatttagtgcccccactgtattaatagtgtattaaatactggat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tatgagttaactggttcatttagtgcccccactgtattaatagtgtattaaatactggat 251
Query: 180 ggggtcccagagagcatactgagtagatttaagacattgctgccctcaga 229
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ggggtcccagagagcatactgagtagatttaagacattgctgccctcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 630
Length adjustment: 9
Effective length of query: 220
Effective length of database: 621
Effective search space: 136620
Effective search space used: 136620
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
