Query= MSMg01no206_p15.b1 MSMg01no206_p15.b1 CHROMAT_FILE:
MSMg01no206_p15.b1 PHD_FILE: MSMg01no206_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:19 2005
(585 letters)
>mm_chr9_81821265_81822248
Length = 984
Score = 911 bits (471), Expect = 0.0
Identities = 555/583 (95%), Gaps = 5/583 (0%)
Strand = Plus / Plus
Query: 5 gaattccttaactcttccggatgtttcataacttttttaatcttttgactgtttaccttt 64
|||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 205 gaattccttaactcttggggatgtttcaaaacttttttaatcctttgactgtttaccttt 264
Query: 65 ttggttttctcttgcattctgcttatttgctgttggtcaaaagttgcagttttatccaga 124
|||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 ttggttttctcttg-attttgcttatttgctgttggtcaaaagttgcagtcctatccaga 323
Query: 125 taaacactaatgctgaaggtcccccatattggtac-ttctttgagaaagtttctcatgcc 183
||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 324 taaacactaatgctgaaggtcccccatattggtacatt-tttgagaaagtttctcacgcc 382
Query: 184 tgctgtctggaaagggatgtgagggaaaagtaaaggcaaacattattaacattacaagcc 243
||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 383 tgctgtcaggaaagggatgtgaggggaaagtaaaggcaaaaattattaacattacaagcc 442
Query: 244 ctaggcagggaaccagaagctggaacagtccggtataaatgtccaaagtaaagtccatta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctaggcagggaaccagaagctggaacagtccggtataaatgtccaaagtaaagtccatta 502
Query: 304 gactatgttgaaaggctcaaaattatcttttggcatcgtcttcctgtttctggcctgtat 363
|| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 503 gaatatattgaaaggctcaaaattatcttttgacatcgtcttcctgtttctggcctgtat 562
Query: 364 gggctggcccccacaatgatgaaccctggaatttgggctttttgagagttgctgaagtga 423
||||||| | | | |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 563 gggctggtctctagaatgatgaacccgggaatttgggctttttgagagttgctgaagtga 622
Query: 424 ctagaataaacaagacacccttcccatatggattctaggtatttggtcatcatttaa-tt 482
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 623 ctagaataaacaagacacccttcccatatggattctaggtatttggtcatcattcaagtt 682
Query: 483 ttagcttaaaacataatgggtctatctctgttggctgtaagtaagtgccactctatgttg 542
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 683 ttagcttaaaacataatgggtctatctctgttggctgtaagtaagtgccacgctattttg 742
Query: 543 agatctgatgtcttatatctgcacacaattttttttttgttat 585
|||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 743 agatctgatgtcttatatctgcacactattttttttt-gttat 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 984
Length adjustment: 10
Effective length of query: 575
Effective length of database: 974
Effective search space: 560050
Effective search space used: 560050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no206_p15.g1 MSMg01no206_p15.g1 CHROMAT_FILE:
MSMg01no206_p15.g1 PHD_FILE: MSMg01no206_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:19 2005
(286 letters)
>mm_chr9_81921190_81921876
Length = 687
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%), Gaps = 1/287 (0%)
Strand = Plus / Minus
Query: 1 cagtcatgaaatagagatattttccttctgactg-aaaaaaaaatgttttgcttttggag 59
||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||||||||
Sbjct: 487 cagtcatgaaatagagatatttttcttctgactgaaaaaaaaaatggtttgattttggag 428
Query: 60 ccagccagcataagctatgctcaaatgttttatttatttctatgtctaagacttgggaat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ccagccagcataagctatgctcaaatgttttatttatttctatgtctaagacttgggaat 368
Query: 120 taactctaatccatgtatggatgtctgatcttgatctttgcatgcttaaagacttagagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 taactctaatccatgtatggatgtctgatcttgatctttgcatgcttaaagacttagagt 308
Query: 180 gctttatcctcaggaaatgttagtcatattgtctatttttatctatgccacttaaataaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gctttatcctcaggaaatgttagtcatattgtctatttttatctatgccacttaaataaa 248
Query: 240 taccatcaattggaaatctccactagacttcatttattcttaaaaag 286
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 taccatcaattggaaatctccactagacttcatttattcttaaaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 687
Length adjustment: 9
Effective length of query: 277
Effective length of database: 678
Effective search space: 187806
Effective search space used: 187806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
