Query= MSMg01no207_b05.b1 MSMg01no207_b05.b1 CHROMAT_FILE:
MSMg01no207_b05.b1 PHD_FILE: MSMg01no207_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:32 2005
(375 letters)
>mm_chr9_87894775_87895549
Length = 775
Score = 694 bits (359), Expect = 0.0
Identities = 371/375 (98%)
Strand = Plus / Plus
Query: 1 ttaaatgcaggtcatttgttcccttttccaactttttcatcttgtgctccctgttccatt 60
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 201 ttaaatgcaggtcatttgttcccttttccaaattgttcatcttgtgctccctgttccatt 260
Query: 61 ttataggagggaaagtatttctaaatgtcctgtatgatcatggctcttctttctcctaca 120
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 261 ttataggagggaaagtatttctaaacgtcctgtatgatcatggcttttctttctcctaca 320
Query: 121 aaatccaaattaatactaaaatgctgctcagcacaattcttcagttgcttaactcaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatccaaattaatactaaaatgctgctcagcacaattcttcagttgcttaactcaataa 380
Query: 181 aatgtctataacattgaaaagtatttttaaaaatatgtcttaaaagccaatatatggtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgtctataacattgaaaagtatttttaaaaatatgtcttaaaagccaatatatggtaa 440
Query: 241 ctgcctttccttgagagctcactggattttccagctttttcaggaaatgaggtactcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgcctttccttgagagctcactggattttccagctttttcaggaaatgaggtactcagg 500
Query: 301 tgaattttccagatagcctcctcctcctcctcagaggacttaaaaagttcataaatcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaattttccagatagcctcctcctcctcctcagaggacttaaaaagttcataaatcttc 560
Query: 361 taccatgtggagtca 375
|||||||||||||||
Sbjct: 561 taccatgtggagtca 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no207_b05.g1 MSMg01no207_b05.g1 CHROMAT_FILE:
MSMg01no207_b05.g1 PHD_FILE: MSMg01no207_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:32 2005
(337 letters)
>mm_chr9_88016894_88017631
Length = 738
Score = 551 bits (285), Expect = e-161
Identities = 319/337 (94%), Gaps = 15/337 (4%)
Strand = Plus / Minus
Query: 7 tgcttacgagtctgggtatccttggaactttcaaggccagcacatggc--tg--acagga 62
|||||||||||||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 536 tgcttacgagtctgggtatccttggaactttcaaggccagcacatggctttgaaagagga 477
Query: 63 gtctccctacagcgtttcccatctcaaaagctccgagtagcctgtacataactgcaacag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gtctccctacagcgtttcccatctcaaaagctccgagtagcctgtacataactgcaacag 417
Query: 123 aacctaggcagcggcaagagaaaatgaagaactgtgtgaagaggaagagctggagtcgga 182
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 atcctaggcagccgcaagagaaaatgaagaactgtgtgaagaggaagagctggagtcgga 357
Query: 183 ttcagatgacgaagtggagcctgacctgagcaatatgaagatcatcgaggagctctgcca 242
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttcagat---gaagtggagcctgacctgagcaatatgaagatcatcgaggagctctgcca 300
Query: 243 gtatgtacagactgagtggcacagaaaagagtgatggcgac----ttttgcagctgaaca 298
||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 299 gtatgtacagactgagtggcacagaaaagagtgatggcgacggca----gcagctgaaca 244
Query: 299 tggagtgcctgcgtgactatgtgaatgtaggttaatg 335
|||||||||||||||||||||||||||||||||||||
Sbjct: 243 tggagtgcctgcgtgactatgtgaatgtaggttaatg 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
