Query= MSMg01no214_l24.b1 MSMg01no214_l24.b1 CHROMAT_FILE:
MSMg01no214_l24.b1 PHD_FILE: MSMg01no214_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:10 2005
(319 letters)
>mm_chr9_110431771_110432489
Length = 719
Score = 557 bits (288), Expect = e-163
Identities = 312/328 (95%), Gaps = 13/328 (3%)
Strand = Plus / Minus
Query: 5 gaattccagggcagccaaggctacagagaaaccctgtctgaaaaaaaactttttcaaccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gaattccagggcagccaaggctacagagaaaccctgtctgaaaaaaaactttttcaaccc 371
Query: 65 agacttgccttataattcccaaacctccaacctcattctccatgtgattggcctcctgag 124
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agacttgccttaaaattccccaacctccaacctcattctccatgtgattggcctcctgag 311
Query: 125 caaaccaatagatactttttagcttattggatactttccatacgtt-------------a 171
|||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 310 caaaccaatagatactttttagcttattggatactttccatacgttaaaaaaaaaaaaaa 251
Query: 172 aaaaaaaaaaaaagacagggcctcactatgtagccctgactggcctagaactcactgtgt 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aaaaaaaaaaaaagacagggcctcactatgtagccctgactggcctagaactcactgtgt 191
Query: 232 agaccaggcaggccttacacctacctctgccttccgagtgctaggattaatgacatgtgc 291
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 190 agaccaggcaggccttacacctacctctgccttccgagtgctaggattaaagacatgtgc 131
Query: 292 caccatgccacgacgtagggtttccatt 319
||||||||||||||||||||||||||||
Sbjct: 130 caccatgccacgacgtagggtttccatt 103
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no214_l24.g1 MSMg01no214_l24.g1 CHROMAT_FILE:
MSMg01no214_l24.g1 PHD_FILE: MSMg01no214_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:10 2005
(290 letters)
>mm_chr9_110300692_110301381
Length = 690
Score = 509 bits (263), Expect = e-148
Identities = 281/287 (97%)
Strand = Plus / Plus
Query: 4 ctgcaaataggccaaaggcaccaaacaagagcaagagaacaaattcacccgcccctcctg 63
|||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 204 ctgcaaataggctaaaggcaccaaacaagagcaagagaacaaacccaccagcccctcctg 263
Query: 64 acaaggaacgcatcaatgaaaaaagcgctccatactttcctccactcaagaaaagccaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acaaggaacgcatcaatgaaaaaagcgctccatactttcctccactcaagaaaagccaga 323
Query: 124 gggagcgtgatgagaaatgagacagcgccggcagtggtggcacatgccaggaggatttgc 183
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 324 gggagcgtgatgagaaatgagacagcgccggcagtggtggcgcatgccaggaggatttgc 383
Query: 184 tgaaggaggcagaggcaggaagatcacgagttcgagaaatgagccagcatggagtggggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgaaggaggcagaggcaggaagatcacgagttcgagaaatgagccagcatggagtggggc 443
Query: 244 gtcaaccaataacaccagggctggagagacagctcagcagttcagag 290
||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtcaaccaaaaacaccagggctggagagacagctcagcagttcagag 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
