Query= MSMg01no215_g02.b1 MSMg01no215_g02.b1 CHROMAT_FILE:
MSMg01no215_g02.b1 PHD_FILE: MSMg01no215_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:02 2005
(588 letters)
>mm_chr9_89215439_89216426
Length = 988
Score = 1075 bits (556), Expect = 0.0
Identities = 580/588 (98%)
Strand = Plus / Plus
Query: 1 ccagcacttggtttaaagagctttgtacacttggacccttgcctctgtctcattctggta 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 ccagcacttggtttaaagagctttgtagacttggacccttgcctctgtctcattctggta 260
Query: 61 tccttttcaaggattacctcctagtctaggctgacacaaggacatgcaatgcaggccaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccttttcaaggattacctcctagtctaggctgacacaaggacatgcaatgcaggccaga 320
Query: 121 taagaggagtgattaaggcatacttacacaaaaaacgtatctgatatttctttgaaatta 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 taagaggagtgattaaggcatacttacaccaaaaacgtatctgatatttctttgaaatta 380
Query: 181 aaatcgcataggacatcctatactttttttttctatacctgctacctcttctatggtcac 240
|||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 381 aaatcgcataggacattctatacttttattttctatacctgctacctcttctatggccac 440
Query: 241 atagacatcaaactccagtaatctatgagaatacctctgttcttcttattaccacgcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 441 atagacatcaaactccagtaatctatgagaatacctctgttcttcttattagtaggcagt 500
Query: 301 gtggttgtaggattagattctcactgacatccacctcagagaagagagagatacagcagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtggttgtaggattagattctcactgacatccacctcagagaagagagagatacagcagt 560
Query: 361 cccatgttactgtttgatgacagatgataggagtaaatgactcagtctcttaactgcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccatgttactgtttgatgacagatgataggagtaaatgactcagtctcttaactgcttg 620
Query: 421 gtgactctctggagatgtgatgataattgcagaagcaaaaatcaatgtagagactccatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgactctctggagatgtgatgataattgcagaagcaaaaatcaatgtagagactccatt 680
Query: 481 agaatggatctccaagtatgtgtaaggagagaaatctctgctgttctttggaggatctgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaatggatctccaagtatgtgtaaggagagaaatctctgctgttctttggaggatctgt 740
Query: 541 agtgtgatggagaaataaagattattattattattatttattaggtat 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtgtgatggagaaataaagattattattattattatttattaggtat 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no215_g02.g1 MSMg01no215_g02.g1 CHROMAT_FILE:
MSMg01no215_g02.g1 PHD_FILE: MSMg01no215_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:02 2005
(192 letters)
>mm_chr9_89387851_89388441
Length = 591
Score = 282 bits (146), Expect = 7e-81
Identities = 180/194 (92%), Gaps = 9/194 (4%)
Strand = Plus / Minus
Query: 1 aggggtacgtcctagaaacaggaaagagggtcacattttttaaatgtaaaatctaattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aggggtacgtcctagaaacaggaaagagggtcacattttttaaatgtaaaatctaattca 289
Query: 61 taaagttaaaaccttaacgactgccattcttaacaagcaacattcaatcttgcatgtata 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 taaagttaaaaccttaacaactgccattcttaacaagcaacattcaatcttgcatgtata 229
Query: 121 tgtagatattaaatgtacatacacatgca-----a-acagagag-g-gggggggagagag 172
|||||||||| |||||||||||||||||| | |||||||| | | | | |||||||
Sbjct: 228 tgtagatatt-aatgtacatacacatgcacacacacacagagagagagagagagagagag 170
Query: 173 agggagagagagag 186
|||||| |||||||
Sbjct: 169 agggagggagagag 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 591
Length adjustment: 8
Effective length of query: 184
Effective length of database: 583
Effective search space: 107272
Effective search space used: 107272
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
