Query= MSMg01no215_l21.b1 MSMg01no215_l21.b1 CHROMAT_FILE:
MSMg01no215_l21.b1 PHD_FILE: MSMg01no215_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:29 2005
(246 letters)
>mm_chr9_11284736_11285381
Length = 646
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Minus
Query: 1 ttatgtcttttgtcatttttcactgagaggttcaaatgcacctgcaaggaactttttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttatgtcttttgtcatttttcactgagaggttcaaatgcacctgcaaggaactttttgat 375
Query: 61 ctactgtattcatgtcagtgataaaagttactccacatttatagaaattcaccttcctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctactgtattcatgtcagtgataaaagttactccacatttatagaaattcaccttcctgt 315
Query: 121 gaatacagtttgggcttcagaaagcagaaaggagaagtacctgcttgaacaaatctattt 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gaatgcagtttgggcttcagaaagcagaaaggagaagtacctgcttgaacaaatctattt 255
Query: 181 taacagaaaaaatttccagaagatattatttcaacataagatgctgattttctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 taacagaaaaaatttccagaagatattatttcaacataagatgctgattttctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no215_l21.g1 MSMg01no215_l21.g1 CHROMAT_FILE:
MSMg01no215_l21.g1 PHD_FILE: MSMg01no215_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:29 2005
(234 letters)
>mm_chr9_11148440_11149072
Length = 633
Score = 429 bits (222), Expect = e-125
Identities = 231/234 (98%), Gaps = 1/234 (0%)
Strand = Plus / Plus
Query: 1 cctgggatgaccagccatcagatagataaaacagccctggaagacaagccagctgcttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgggatgaccagccatcagatagataaaacagccctggaagacaagccagctgcttgt 260
Query: 61 cctaatcactcttcttgttagtcaagagaatgatgttataaagacaatatgggaagtaag 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 cctaatcactcttcttgttagtcaagagaatgatgttatgaagacaatatgggaagtaag 320
Query: 121 acatccacagacacttaccaaggtgagtcatctgatgttcccaactaaaagcccaatctt 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatcctcagacacttaccaaggtgagtcatctgatgttcccaactaaaagcccaatctt 380
Query: 181 atcgctacagagtgctactgtgccctagatatgatcttctacctggggacagct 234
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcgctacagagtgc-actgtgccctagatatgatcttctacctggggacagct 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 633
Length adjustment: 9
Effective length of query: 225
Effective length of database: 624
Effective search space: 140400
Effective search space used: 140400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
