Query= MSMg01no216_d02.b1 MSMg01no216_d02.b1 CHROMAT_FILE:
MSMg01no216_d02.b1 PHD_FILE: MSMg01no216_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:05 2005
(136 letters)
>mm_chr9_29894810_29895345
Length = 536
Score = 246 bits (127), Expect = 5e-70
Identities = 133/135 (98%)
Strand = Plus / Minus
Query: 1 tggctttcccaagagagactgacttaacatgaatgacattctcatccgttcatgctgccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tggctttcccaagagagactgacttaacatgaatgacattctcatccgttcatgctgccc 276
Query: 61 ctgacgtctggatcttcctctcctgcatctgctcctgcaaacgtattatgataagaaatg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 275 ctgacgtcttgatcttcctctcctgcatctgctcctgcaaacgtattatgagaagaaatg 216
Query: 121 tgcttccttctaaac 135
|||||||||||||||
Sbjct: 215 tgcttccttctaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 136
Length of database: 536
Length adjustment: 8
Effective length of query: 128
Effective length of database: 528
Effective search space: 67584
Effective search space used: 67584
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no216_d02.g1 MSMg01no216_d02.g1 CHROMAT_FILE:
MSMg01no216_d02.g1 PHD_FILE: MSMg01no216_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:05 2005
(384 letters)
>mm_chr9_29728344_29729127
Length = 784
Score = 603 bits (312), Expect = e-177
Identities = 365/408 (89%), Gaps = 40/408 (9%)
Strand = Plus / Plus
Query: 1 atttcccctagaacaggggctccagcctcttggacaccattaattggtttctctagcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 atttcccctagaacaggggctccagcctcttggacaccattaattggtttctctagcatg 248
Query: 61 catatacaggcacag--------------------------acacacacacacacacaca 94
||||||||||||||| |||||||||||||||||||
Sbjct: 249 catatacaggcacagacacagacacacacacacacagacacacacacacacacacacaca 308
Query: 95 cacagagggatatggacccatacatatacacacacagagggatatccacatacactcagg 154
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cacagagggatatggacatatacatatacacacacagagggatatccacatacactcagg 368
Query: 155 cacagatatacaaacatacaggaaggcatacacatacatacaaacaaacacacacaaaca 214
||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 369 cacagatatacaaacatacaggaaggcatacacatacat--------------acaaaca 414
Query: 215 aacacacacatatagacatgcaaccatttatacatagacacagctatacacaaaaatata 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aacacacacatatagacatgcaaccatttatacatagacacagctatacacaaaaatata 474
Query: 275 tacaaagagagacacacagagaaacacatgagaagcatgtgtgtgtgcgtatacatctct 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tacaaagagagacacacagagaaacacatgagaagcatgtgtgtgtgcgtatacatctct 534
Query: 335 ctctttcacacacacacacacacacacacacacacacacacacacaca 382
|||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 535 ctctttcacacacacacacacacacacacacacacacaaacacacaca 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 170
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
