CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAATACCTTTTCCCCACAGTAAGATAGGTGAGACATCCATAATGTTG
TCTCTAGTCAGAGGCATGTCCCAAGCCCAAGGAAGCACTCACATACTCCA
AATAGTTTTTAAAATTTAAAAACAATTAAGAGGGAGAGTGGAAGGATATA
AGCCAGATAGGTAGGGGTGTTTACCTAGCATGTAAAGGCCTCAAATTAAA
TCTATGGTACCATCAAACTTAAAAACAAAATGTACTGAATCGATTTACAC
TGGGATTATTTCCATGCTATTTTATAGATTCTGCCTTAGCTTTAAAGGGG
TTTGTCTTAGCCTTTTGTTCTCAGTGCAGTCATGACATACGTATTTTAAT
CACTAACTTTGCAAAAATATGCCAAAGACCCAGTCCATGAAGGCATCAAG
ACTGACCAAGCAGATCAAGAACCAAAGGTATAAAACATTCTTGTCCAAAG
GCTTTAGAGTAAATTTGCAAAGGAGTTCTCCATTTCTGCAATTAAAAAAT
CCAATTCCTCAATTTCTAACACTGTAACACCTCAGATATACTTTTACCTA
AGTAAAATTCTACTTACTAGTTTTAAAAAATCCTTTTTACTCTAAAGGCG
TATTTAATTAACAAAGCGAAATTCTACATAATATCACGAAGAAAAAACTT
TTTACTTGCCGGGAGTGGTGGTGCACACCTTTGATCCAGCACTCGG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGGTTCCTTCTAGATAGAGGTCTA
CAATGATAACCTCACTTCTAATAGACAACTTTCAACCTCACAGCCCCAAG
ATGCTTGCCTAAGCCCCAACCACCATAGTTGTATCCAGGACAATAAGAAG
AAATAAAAACTTTCTTGCACGTGCTCAACTGGCCAGGAAGAACGACACTG
CAACAGGATCCTTCTGCACACGTTTATTGGGAGAGCATTGATTGCATAGG
CGAAAGAAGAACAACCCCGAACAAGGAAAATGATGCTGCTTATATACCCC
TCCATGTGACGTGTCAGTTCCTGATCACCCGCCCACTCATCACCCCACTA
CTATGCCCCGGGATGGGCAGCGACTTGACACAAAATTACTCTTGCACCTG
CGCACATTACTTGTTTACCAGTTAGGCACAGCGGAGGCTCATGATGGCAA
TTGCTCACGGCTCCCCACAATGAAGAAAAAAATATGTTGGGGGCTGGAGA
GATGGCTCAGCAGTTAAGAGCACTGACTGCTCTTCCAGAGGGCCTGAGTT
CAATTCTCAGCAACCACCTGGTGGCTCCCAACCTCTTCTGGTGTGTCTGA
AAACAGATACAGTGTATACATACACATATATATAATAAACCTTNAAATAA
TAATAATAATAATAGTATGTCATCTGCATATATTTCACCTGAGAGGAATT
N

Query= MSMg01no231_e14.b1 MSMg01no231_e14.b1 CHROMAT_FILE:
MSMg01no231_e14.b1 PHD_FILE: MSMg01no231_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:32 2005
         (702 letters)



>mm_chr9_58446062_58447162
          Length = 1101

 Score = 1282 bits (663), Expect = 0.0
 Identities = 690/703 (98%), Gaps = 10/703 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaatacct----tttccccacagtaagataggtgagacatccataatgttgtctc 60
           |||||||||||||        |||||||||||||||||||||||||||||||||||||||
Sbjct: 862 gaattcaatacctaaaa----cccacagtaagataggtgagacatccataatgttgtctc 807

                                                                       
Query: 61  tagtcagaggcatgtcccaagcccaaggaagcactcacatactccaaatagtttttaaaa 120
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 tagtcagaggcatg-cccaagcccaaggaagcactcacatactccaaatagtttttaaaa 748

                                                                       
Query: 121 tttaaaaacaattaagagggagagtggaaggatataagccagataggtaggggtgtttac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 747 tttaaaaacaattaagagggagagtggaaggatataagccagataggtaggtgtgtttac 688

                                                                       
Query: 181 ctagcatgtaaaggcctcaaattaaatctatggtaccatcaaacttaaaaacaaaatgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ctagcatgtaaaggcctcaaattaaatctatggtaccatcaaacttaaaaacaaaatgta 628

                                                                       
Query: 241 ctgaatcgatttacactgggattatttccatgctattttatagattctgccttagcttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ctgaatcgatttacactgggattatttccatgctattttatagattctgccttagcttta 568

                                                                       
Query: 301 aaggggtttgtcttagccttttgttctcagtgcagtcatgacatacgtattttaatcact 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 567 aaggggtttgtcttagccttttgttctcagtgcagtcatgacatatgtattttaatcact 508

                                                                       
Query: 361 aactttgcaaaaatatgccaaagacccagtccatgaaggcatcaagactgaccaagcaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aactttgcaaaaatatgccaaagacccagtccatgaaggcatcaagactgaccaagcaga 448

                                                                       
Query: 421 tcaagaaccaaaggtataaaacattcttgtccaaaggctttagagtaaatttgcaaagga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tcaagaaccaaaggtataaaacattcttgtccaaaggctttagagtaaatttgcaaagga 388

                                                                       
Query: 481 gttctccatttctgcaattaaaaaatccaattcctcaatttctaacactgtaacacctca 540
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 387 gttctccatttctgcaattaaaaaatccaaatcctcaatttctaacactgtaacacctca 328

                                                                       
Query: 541 gatatacttttacctaagtaaaattctacttactagttttaaaaaatcctttttactcta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gatatacttttacctaagtaaaattctacttactagttttaaaaaatcctttttactcta 268

                                                                       
Query: 601 aaggcgtatttaattaacaaagcgaaattctacataatatcacgaagaaaaaacttttta 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaggcgtatttaattaacaaagcgaaattctacataatatcacgaagaaaaaacttttta 208

                                                      
Query: 661 cttgccgggagtggtggtgcacacctttgat-ccagcactcgg 702
           ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 207 cttgccgggagtggtggtgcacacctttgatcccagcactcgg 165


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1101
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1091
Effective search space:   754972
Effective search space used:   754972
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)