Query= MSMg01no234_c22.b1 MSMg01no234_c22.b1 CHROMAT_FILE:
MSMg01no234_c22.b1 PHD_FILE: MSMg01no234_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:04 2005
(669 letters)
>mm_chr9_15432413_15433481
Length = 1069
Score = 654 bits (338), Expect = 0.0
Identities = 350/354 (98%)
Strand = Plus / Plus
Query: 1 ggaattggttaggctcactccactgtcactgtattagcaccatttatacccctctcttcc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 ggaattggttaggctcactccactgtcactgtattagcaccatttaaacccctctcttcc 260
Query: 61 tcacagttcgctgcgtccttggaaaactgccagttaggtggatcaggctgtattggggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacagttcgctgcgtccttggaaaactgccagttaggtggatcaggctgtattggggac 320
Query: 121 aagggagtagcttctaatggtgggcaccaacccgggtcctcggtaactgattccaaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagggagtagcttctaatggtgggcaccaacccgggtcctcggtaactgattccaaattc 380
Query: 181 tttcctctttcagccacattccaaccataattgatgacagaatctcagtctgaccctgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcctctttcagccacattccaaccataattgatgacagaatctcagtctgaccctgtt 440
Query: 241 gatttcactgataaaatgacagtatgtaccatatatataccatatatgtgtatatatgat 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatttcactgagaaaatgacagtatgtaccatatatataccatatatgtgtatatatgat 500
Query: 301 atagaacacacacacaatatagaaatcacaatacacttatacatgcactattat 354
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 atagaatacacacacaatatagaaatcacaatacacttatacatgtactattat 554
Score = 284 bits (147), Expect = 1e-80
Identities = 150/151 (99%)
Strand = Plus / Plus
Query: 353 atacaagtcatatatattatatatgtatgtgtatatatttatatgacataatacagacaa 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 atacaagtcatatatattatatatgtatgtgtatatatttatatgacataatacagacaa 978
Query: 413 tagagaaatcacacagatacatgtactatatacaagtcacacatataaaaatatatgtgt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 tagagaaatcacacagatacatgtactatatacaagtcacacatataaaaatatatgtgt 1038
Query: 473 atatatgacatagaaagcacacacgatatag 503
||||||||||||||||||||||| |||||||
Sbjct: 1039 atatatgacatagaaagcacacatgatatag 1069
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no234_c22.g1 MSMg01no234_c22.g1 CHROMAT_FILE:
MSMg01no234_c22.g1 PHD_FILE: MSMg01no234_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:04 2005
(292 letters)
>mm_chr9_15571967_15572658
Length = 692
Score = 547 bits (283), Expect = e-160
Identities = 289/291 (99%)
Strand = Plus / Minus
Query: 1 taagcatatgttctcagtacaacctgaaactgccacaatcatcagaaattttgagagatc 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 491 taagcatatgttctcagtacaacttgaaactgccacaatcatcagaaattttgagagatc 432
Query: 61 atcccagcccagagaaacacaagggttgagaaaatccaaagcagtgtgtctctcagaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atcccagcccagagaaacacaagggttgagaaaatccaaagcagtgtgtctctcagaatt 372
Query: 121 ttctggaatggcaaacgtattcaggaaaagtaaatgagtaaactgttccttttaattaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttctggaatggcaaacgtattcaggaaaagtaaatgagtaaactgttccttttaattaat 312
Query: 181 aaagtatcaacatttattggatgtaccaaactgaaaaacattataaaaatggggtaaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaagtatcaacatttattggatgtaccaaactgaaaaacattataaaaatggggtaaggg 252
Query: 241 agctaatttaaaaatctctccactactatttattgctcaaacttaaaatta 291
|||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 251 agctaatttaaaaatctctccactactatttactgctcaaacttaaaatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
