Query= MSMg01no235_p14.b1 MSMg01no235_p14.b1 CHROMAT_FILE:
MSMg01no235_p14.b1 PHD_FILE: MSMg01no235_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:25 2005
(318 letters)
>mm_chr9_41909959_41910676
Length = 718
Score = 561 bits (290), Expect = e-164
Identities = 308/314 (98%)
Strand = Plus / Minus
Query: 5 gaattcccgctttttcttgtccggacggtgagctgtaacctctaggtcaaccaggcccat 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattcccgctttggcttgtccggacggtgagctgtaacctctaggtcaaccaggcccat 459
Query: 65 ttttccctaagaccagccctgagaaggctctgtgtctgcccaagagaaggtaagaagtta 124
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ttttccctaagaagagccctgagaaggctctgtgtctgcccaagagaaggtaagaagtta 399
Query: 125 caaggataggctaaaaatagcttgtttgaattgttccacccggacaaggcaaggcaggtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 caaggataggctaaaaatagcttgtttgaattgttccacccggacaaggcaaggcaggtt 339
Query: 185 gatgagtggcccgggattggcttcagggctagggttggttcttgtcaacttcctcttaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gatgagtggcccgggattggcttcagggctagggttggttcttgtcaacttcctcttaac 279
Query: 245 ctctattaagtgtaagactctggagacagtcctttttgtttgcaggtgtcttgaggcaga 304
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 278 ctctattaagtgtaagactctggagacagtccagtttgtttgcaggtgtcttgaggcaga 219
Query: 305 tgtttttcctccat 318
||||||||||||||
Sbjct: 218 tgtttttcctccat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no235_p14.g1 MSMg01no235_p14.g1 CHROMAT_FILE:
MSMg01no235_p14.g1 PHD_FILE: MSMg01no235_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:25 2005
(169 letters)
>mm_chr9_41764281_41764850
Length = 570
Score = 306 bits (158), Expect = 6e-88
Identities = 167/172 (97%), Gaps = 5/172 (2%)
Strand = Plus / Plus
Query: 1 actaccctttccacacctgtctttctccctcccttcatacctaggtaccaata---tcag 57
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 201 actaccctttccacacctgtctttctccctcccttcatacctaggta--aataatatcag 258
Query: 58 ccacccactttgtcttacaggctggggtggggatattggaattagtctagccctgtatca 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ccacccactttgtcttacaggctggggtggggatattggaattagtctagccctgtatca 318
Query: 118 tttcatttattcattcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtat 169
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tttcatttattcattcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtat 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 570
Length adjustment: 8
Effective length of query: 161
Effective length of database: 562
Effective search space: 90482
Effective search space used: 90482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
