CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCAACAGCTACTTTTCCTTGCTCTGTTCTGGGTGGGAAGAGCTGGT
GCTCAGTGTGGTTATGATATCCCTAATATGGTTCATAAGGTTATAATATG
AATTTATCTACGATCAGTGCTGTCAGTCCTGTTTGTATCATTTTCATTGG
ATGTTTGTATTTGATCTCTGGAAACTGGTTTTTAATTTTGTTGTTTCAGA
AATAAGCAGAACTTTTGGTGATGGGTTGTATATTGTTGCACAAAAATATT
TTGCTAGAAAGACTTATGGATAGGTTGCAAGTCATGAGTGTATTTTATGA
CACTACTGCTGGAAGTCATGGCCTCACCCACGGCCTCGTGGAAATTTTCT
AGCTTACATAAACAATCCTGAGAGAACATATGTGGTCATAACAGTAAGAA
TGTTTGTGGGTAAAGAGGACACTGTGACTGTCGTTTCCAGGAGCTGAAGA
TTGCCAACTGACCTTCGGAGATCCCCCAGACTCTTCCCCCCTCTCTTGAA
GCCTCCTCTTGCTTATGTTTATACTACCACTCCTGAATAAGGTTTTTTAG
AGCTTGATCAGTATAATTGACTTGCTCTCATTCTTTGTGTCTCTTTTTTC
TCCCACTCTCTCATTCCTTTCCTTGCCCTATGTCCTTGTTGATTATCCCT
GTAGGTTGAGGCAAACAGGCGCCCAACGTAGGGCTCTGGGTTTGGG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGATGAGCATTTTCAAAGAAGGT
TTAAAGTAGCATCAAATAAATAGAACGAGGGGAAATTTTGTCTACTTAAA
ATAAAATAAAAGTGGTTAAGAAAAACAAAAATTCTGAGAGTTTATTATTT
CAGAAAACTGAAAATTAACAAGAAGTGCTCGCGTGCGCTCTCTCTCTCTT
TCTCTCTCTCTTTCTCTGCAGTCCAGAAAGAAAACGAAAAAGGAAATCAG
CTGAATCCTAAGAAGATGCAAGATCAGCAGCAGGTAACCTTGTCAACTTA
ACTCTGTGTGTACAGAGTCTCCTCAGAGACATCTCTGGGTGTGTTCATGT
AGAGACTTAATGGAGGATAGAACACAGTCTCTGAATGAATCCCCCATCCA
TGGGCTGGGGTCCAGGATTCAATCAAGAGAAGAAAAGGACAAAGAAGCCA
GCACCAGAGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CCACTCCTGACTATGGATGCCTTATGATTAGTCAGTATGTTGACCTTCCA
TAATGTATTACATTCCCTCTCTGACTGTTGTGTCTATGCTGCCTATGGAA
TTTTCTGATCGTGAAATCCCTCCTATATTCTGCTGGCGATGCTTGCCTCT

Query= MSMg01no236_i18.g1 MSMg01no236_i18.g1 CHROMAT_FILE:
MSMg01no236_i18.g1 PHD_FILE: MSMg01no236_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:08 2005
         (543 letters)



>mm_chr9_6652869_6653811
          Length = 943

 Score =  915 bits (473), Expect = 0.0
 Identities = 483/487 (99%), Gaps = 2/487 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagatgagcattttcaaagaaggtttaaagtagcatcaaataaatagaacgaggggaaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagatgagcattttcaaagaaggtttaaagtagcatcaaataaatagaacgaggggaaat 260

                                                                       
Query: 61  tttgtctacttaaaataaaataaaagtggttaagaaaaacaaaaattctgagagtttatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtctacttaaaataaaataaaagtggttaagaaaaacaaaaattctgagagtttatt 320

                                                                       
Query: 121 atttcagaaaactgaaaattaacaagaagtgctcgcgtgcg--ctctctctctctttctc 178
           |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 321 atttcagaaaactgaaaattaacaagaagtgctcgcgtgcgctctctctctctctttctc 380

                                                                       
Query: 179 tctctctttctctgcagtccagaaagaaaacgaaaaaggaaatcagctgaatcctaagaa 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctctctttctctgcagtccagaaagaaaacgaaaaaggaaatcagctgaatcctaagaa 440

                                                                       
Query: 239 gatgcaagatcagcagcaggtaaccttgtcaacttaactctgtgtgtacagagtctcctc 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgcaagatcagcagcaggtaaccttgtcaacttaactctgtgtgtacagagtctcctc 500

                                                                       
Query: 299 agagacatctctgggtgtgttcatgtagagacttaatggaggatagaacacagtctctga 358
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 agagacatctctgggtgtgttcatgtagagacttaatggaggagagaacacagtctctga 560

                                                                       
Query: 359 atgaatcccccatccatgggctggggtccaggattcaatcaagagaagaaaaggacaaag 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgaatcccccatccatgggctggggtccaggattcaatcaagagaagaaaaggacaaag 620

                                                                       
Query: 419 aagccagcaccagagtttctctctctctctctctctctctctctctctctctctctctct 478
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagccagcaccagagtctctctctctctctctctctctctctctctctctctctctctct 680

                  
Query: 479 ctctctc 485
           |||||||
Sbjct: 681 ctctctc 687


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 160
Number of extensions: 45
Number of successful extensions: 45
Number of sequences better than 10.0: 1
Number of HSP's gapped: 42
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)