CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACATCTTTAATCCTTGCATATTAGA
GAGACTATAAAACACAATTACATGTTACACAGGAAACAAACTCATAACAC
AATATGAACCAATCAATATTGCTCCTTCCCCCACAGGATTCTGTTTGATA
TTTTAATGAGCCAAATGTCCAGACTAAGAATCAATATCCATTATGGCTCC
TTCGGAAAGGAATACTGGTCCCATCTTGTTACAGAGAGTCATCGGCAGAA
AGTTCTCTCAAGCCCATTTCTCCAGGGCCCAGGCAGTGACCCATGGCAAC
AGTGCTTGACTGGTCTCATTCCTTGACATTTGCTACTACAAATAATTTAC
TAGGATCCCATTTGTCTATGTCAGAACCTTTCCCTTTGATAGAGGGAAAG
GATGAAGTCGGTGGAGAGTGAGGCTCCTCGTTCTGGCTCACAAAACTCAA
GGGTTTTCCAGGGGGCCATGTTTATGTCACTGTGAATGCAGGGGACCTGG
AACACGAGCCTCCATGCTTAGGACATGCTTCTGGGAAAATACAGCAATAG
TCTAGGGACCAGCGGGCACTATGGCCATCCTTCACACGATGGCAAGATGG
AGAAGCATGAAGCAGGGAGGGGGACGAAGGACAGAGAAGGTGAAGAAAGG
AGGAAGATAGGTAGGAAGGAAGTCAGAAAG

TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGCTTATTGCTGTGGCCAGTACCTGACAGAAAGCATATTACGGGA
GCGAGGACTAATTTTGGTTATTGGTTTGAGGTAAAATCCATCACCTCAAG
GGAAAGAGTGTGAGGCAGATGGGCACATTCTATCTGCCCTTGGGATGAGG
TGACCTTTGATATTCAGTAGATTCTTCCTCCTCTCCCTCCCCCTCCCCCT
CCTCCTCCTTCCCTCCCCTTTTTCCCTCCCCTCCTCCCTTTCCTCCTCCT
CTTCTTCTTCCACCTCCTCCACCTCTCCCCCTTCCCTTCCTCTCTCCTCC
CCATCCCTCTCCCCTTCCTCTCCCTCCTCCTCCTCCTCCTTCCCTCCCCT
TCTTCCCTCCCCTCCTCCCTTTCCTCCTCCTCTTCTTCTTCCACCTCCTC
CACCTCTCCCCCTTCCCCTCCTCTCTCCTCCCCATCCCTCTTCCCTTCCT
CTCCCTCCCCCTCCTCCTCCTCCTCCTTCCCTCCCCTTCTTCCCTCTCCT
CCTCCCTTTCCTCCTCCTCTTCTTCTTCCACCTCCACCTCTCCCCCTTCC
CCTCCTCTCTCCTCCCCATCCCTCTCCCCTTCCTCTCTCTCCCCCTCCTT
TTCCTGCTATTCCTCCTCCTCCTCCTATCTTTCCTCTTCCTCCTCTTCCT
CCTCCTCCCCCTCCTCCTTCTTGTCC

Query= MSMg01no237_b02.b1 MSMg01no237_b02.b1 CHROMAT_FILE:
MSMg01no237_b02.b1 PHD_FILE: MSMg01no237_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:47 2005
         (632 letters)



>mm_chr9_115766119_115767155
          Length = 1037

 Score = 1129 bits (584), Expect = 0.0
 Identities = 623/638 (97%), Gaps = 7/638 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   acatctttaatccttgcatattagagagactataaaacacaattacatgttacacaggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatctttaatccttgcatattagagagactataaaacacaattacatgttacacaggaa 260

                                                                       
Query: 61  acaaactcataacacaatatgaaccaatcaatattgctccttcccccacaggattctgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaactcataacacaatatgaaccaatcaatattgctccttcccccacaggattctgtt 320

                                                                       
Query: 121 tgatattttaatgagccaaatgtccagactaagaatcaatatccattatggctccttcgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatattttaatgagccaaatgtccagactaagaatcaatatccattatggctccttcgg 380

                                                                       
Query: 181 aaaggaatactggtcccatcttgttacagagagtcatcggcagaaagttctctcaagccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaggaatactggtcccatcttgttacagagagtcatcggcagaaagttctctcaagccc 440

                                                                       
Query: 241 atttctccagggcccaggcagtgacccatggcaacagtgcttgactggtctcattccttg 300
            |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttctccagggcccaggcggtgacccatggcaacagtgcttgactggtctcattccttg 500

                                                                       
Query: 301 acatttgctactacaaataatttactaggatcccatttgtctatgtcagaacctttccct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 acatttgctactacaaataatttactaggatcccatttgtctatgtcagaagctttccct 560

                                                                       
Query: 361 ttgatagagggaaaggatgaagtcggtggagagtgaggctcctcgttctggctcacaaaa 420
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 ttgatagagggaaaggatgaagtcggtggagagtgaggctcttcgttctggctcacaaaa 620

                                                                       
Query: 421 ctcaagggttttccagggggccatgtttatgtcactgtgaatgca-ggggacctggaaca 479
           ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 621 ctcaagggttttccagggggccatgtttatgtcactgtgaatgcaagggg-cctggaaca 679

                                                                       
Query: 480 cgagcctccatgcttaggacatgcttctgggaaaatacagcaatagtctagggaccagcg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cgagcctccatgcttaggacatgcttctgggaaaatacagcaatagtctagggaccagcg 739

                                                                       
Query: 540 ggcactatggccatccttcacacgatggcaagatggagaagcatgaagcagggaggggga 599
           ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||
Sbjct: 740 ggcactatggccatccttcacaccatggcaagatggagaagcatgaagcaggcagggaga 799

                                                 
Query: 600 cgaaggaca--ga---gaaggtgaagaaaggaggaaga 632
           |||||||||  ||   ||||| ||||||||||||||||
Sbjct: 800 cgaaggacaaagaacagaaggggaagaaaggaggaaga 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1037
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1027
Effective search space:   638794
Effective search space used:   638794
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)