Query= MSMg01no237_m23.b1 MSMg01no237_m23.b1 CHROMAT_FILE:
MSMg01no237_m23.b1 PHD_FILE: MSMg01no237_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:43 2005
(695 letters)
>mm_chr9_15960252_15961345
Length = 1094
Score = 1321 bits (683), Expect = 0.0
Identities = 689/691 (99%), Gaps = 1/691 (0%)
Strand = Plus / Minus
Query: 5 gaattcatcaatgaagttatctgtggttggcttctcatctgtgggagttattgttttaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 gaattcatcaatgaagttatctgtggttggcttctcatctgtgggagttattgttttaat 835
Query: 65 tgttaattggatctctcactcgtggaaaaatctactcagagctgcggtttcatgagaaag 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 tgttaattggatctct-actcgtggaaaaatctactcagagctgcggtttcatgagaaag 776
Query: 125 tatttttccatttctcctaagacatcaagtcttttggaaattacccttcaatatgcaaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tatttttccatttctcctaagacatcaagtcttttggaaattacccttcaatatgcaaac 716
Query: 185 agctcctctcttattccaagtcttactaaaccttttcctaggttacgcttgtcaaatgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 agctcctctcttattccaagtcttactaaaccttttcctaggttacgcttgtcaaatgtc 656
Query: 245 ctccatgttcattaacattttcaaatatataactctcgggtcttatactacagtagtttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ctccatgttcattaacattttcaaatatataactctcgggtcttatactacagtagtttc 596
Query: 305 cataataatctacattatttggtttctttttatttctcattttcccagtttcttaagtgg 364
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 595 cataataatctacattatttggtttctttttatttctcattttcccagattcttaagtgg 536
Query: 365 aaatgtaccttattgatttcaacttttaaaactgcagtctgttataaagtttcctctgag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aaatgtaccttattgatttcaacttttaaaactgcagtctgttataaagtttcctctgag 476
Query: 425 ctttgctttagacgtatcacaggacttcagtgttttgtgcctataaatttttctcaaggc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ctttgctttagacgtatcacaggacttcagtgttttgtgcctataaatttttctcaaggc 416
Query: 485 attccaaatgtttcctgtgacttttatctacatttagtagcctaccattgctcttcattt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 attccaaatgtttcctgtgacttttatctacatttagtagcctaccattgctcttcattt 356
Query: 545 tcattctgtgtggaaaaaaagaccactctgtgtaacgtcgtatttttaagtgtactgaga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tcattctgtgtggaaaaaaagaccactctgtgtaacgtcgtatttttaagtgtactgaga 296
Query: 605 cccatttcatgacctaagagatggattgctctgaaagacactcctaagcctgtgttctgt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cccatttcatgacctaagagatggattgctctgaaagacactcctaagcctgtgttctgt 236
Query: 665 tgtagctggtaaggtgatgtcatatggatat 695
|||||||||||||||||||||||||||||||
Sbjct: 235 tgtagctggtaaggtgatgtcatatggatat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1094
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1084
Effective search space: 742540
Effective search space used: 742540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_m23.g1 MSMg01no237_m23.g1 CHROMAT_FILE:
MSMg01no237_m23.g1 PHD_FILE: MSMg01no237_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:43 2005
(359 letters)
>mm_chr9_15907085_15907842
Length = 758
Score = 640 bits (331), Expect = 0.0
Identities = 352/359 (98%), Gaps = 1/359 (0%)
Strand = Plus / Plus
Query: 1 agatggtaatgagtctagagactgagagcacccatcctcctggttgcacctgtcacagat 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatggtaatgagtctggagactgagagcacccatcctcctggttgcacctgtcacagat 260
Query: 61 gacataactactataacagcattatcctgcatcctccattgagtctttagcctctttagg 120
||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 261 gacgtaactactataacagcatgatcctgcaccctccattgagtctttagcctctttagg 320
Query: 121 aaggagccagctcagactgacgtttaactctgatatgctcacaatccagctgcctcttta 180
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 321 aaggagccagctcagactgacg-ttaactctgatatgctcataatccagctgcctcttta 379
Query: 181 tcctagctttcctctgcgtggtgttccaacacacagttatacataaacacaagtttagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcctagctttcctctgcgtggtgttccaacacacagttatacataaacacaagtttagag 439
Query: 241 gttggggaagtttcatttcataaagaaagcattgatttatgtcacaagaaaacagcaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gttggggaagtttcatttcataaagaaagcattgatttatgtcacaagaaaacagcaatt 499
Query: 301 aaagtatttctcactgattccatatgacccgagtcagaatggctgtcatcaagaaagta 359
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 500 aaagtatttctcactgattccatatcacccgagtcagaatggctgtcatcaagaaagta 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 758
Length adjustment: 9
Effective length of query: 350
Effective length of database: 749
Effective search space: 262150
Effective search space used: 262150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
