Query= MSMg01no237_p07.b1 MSMg01no237_p07.b1 CHROMAT_FILE:
MSMg01no237_p07.b1 PHD_FILE: MSMg01no237_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:54 2005
(658 letters)
>mm_chr9_67974846_67975903
Length = 1058
Score = 746 bits (386), Expect = 0.0
Identities = 395/398 (99%)
Strand = Plus / Minus
Query: 261 caactgtcatttgcctatggaccatgtctgtctcctctctatccagaggcattcctttgt 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 caactgtcatttgcctatggaccatgtctgtctcctctctatccagaggcattcctttgt 999
Query: 321 cctccaggacaaaaaccccttcttccttatcctctgtctcctgtctttgtctcttaatcc 380
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 998 cctccaggacaaaaaccccttcttccttatcctctatctcctctctttgtctcttaatcc 939
Query: 381 ctgccctctgtctttctggagcaaataaatctcctttatgccgagaacttggtctaggga 440
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 938 ctgccctctgtctttctggagcaaataaatctcctttatgccaagaacttggtctaggga 879
Query: 441 ttctaagccaattcttttcaatttgaatccaccttccttactatgcctgcctatatttac 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 ttctaagccaattcttttcaatttgaatccaccttccttactatgcctgcctatatttac 819
Query: 501 tgccactccaactatgcttggcttctgggatctccatctctctaagggcttgttgctaat 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 tgccactccaactatgcttggcttctgggatctccatctctctaagggcttgttgctaat 759
Query: 561 agggccctagggacaagcagacttaaatgatagagcatgccatttgggcaaagtgggtat 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 agggccctagggacaagcagacttaaatgatagagcatgccatttgggcaaagtgggtat 699
Query: 621 gaaaacaagccaggttcggaaaaagctacagaaataag 658
||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gaaaacaagccaggttcggaaaaagctacagaaataag 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_p07.g1 MSMg01no237_p07.g1 CHROMAT_FILE:
MSMg01no237_p07.g1 PHD_FILE: MSMg01no237_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:54 2005
(648 letters)
>mm_chr9_67939448_67940495
Length = 1048
Score = 1195 bits (618), Expect = 0.0
Identities = 642/652 (98%), Gaps = 5/652 (0%)
Strand = Plus / Plus
Query: 1 actggactacaaagttcctcactgagaggcagaggagtcaaaaacgctccctaaaagggt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 actggactacaaagttcctcactgagaggcagaggagtcaaaatcgctccctaaaagggt 260
Query: 61 agcagatatgtatgttcgcaggaagctaaggaggctacatgctactgatgtaagcagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcagatatgtatgttcgcaggaagctaaggaggctacatgctactgatgtaagcagccc 320
Query: 121 tcccacaaggaggctgaaagtggaggaagtggtgactctcctgagtgatttggagtatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccacaaggaggctgaaagtggaggaagtggtgactctcctgagtgatttggagtatga 380
Query: 181 ctcctgtcaggagagtcccaatgcctagctttccttgttagaatgttatagaccaaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcctgtcaggagagtcccaatgcctagctttccttgttagaatgttatagaccaaatat 440
Query: 241 gttcttccagaggctgtgtgttgaagccctggtttccaataggagagcagaggggcaatt 300
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 441 gttcttccagaggctgtgtgttgaaaccc-ggtttccaataggagagcagaggggcaatt 499
Query: 301 ggggtacttaggtttggatgggatcacgaggaagggctcctttaaagaggttggtttctc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 500 ggggtacttaggtttggatgggatcacgaggaagggctcctttaaagaggttagttcctc 559
Query: 361 ttggaaagggagaaaccatggggtgtgtgctcttgacttctcttcctgcaccctccttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttggaaagggagaaaccatggggtgtgtgctcttgacttctcttcctgcaccctccttcc 619
Query: 421 ctgctgcttcctcttcctttctttctcactccatcctctttcctttctccctgctgtctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctgctgcttcctcttcctttctttctcactccatcctctttcctttctccctgctgtctt 679
Query: 481 ctttcctaccctctatttaccctctctttcctccctgttttcttgcctct----ctctta 536
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 680 ctttcctaccctctctttaccctctctttcctccctgttttcttgcctctatctctctta 739
Query: 537 ctttcttccttgactccaccttgtaagaaaattacaagaaggctgtgtcatcaagtcagg 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ctttcttccttgactccaccttgtaagaaaattacaagaaggctgtgtcatcaagtcagg 799
Query: 597 atgtaagctgttagcaggaaccaaatctgctgatacctggccttggacttcg 648
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atgtaagctgttagcaggaaccaaatctgctgatacctggccttggacttcg 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
