TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTAGTCTATCCCGAAGAGATGAATGTATATTCCACACCTATCCTACTCC
TCCCTTGATATCCCCCTGCCCAGCTCCCAGGACCCCCCGGAGCCCACAGT
ATCCTAGATGACCATAGCACACAGGTTAGGAGACACAATTTCAGCCCTAC
CTGTTGTCTTTGCAGTAGCCCATGGCTCTGGATGCCTCCAGCCCTGCCAT
GTTCTGTCTAGGGGCTAGTGACTTGTTTTCTCATCCAGACCACTTTTACA
CTGTATCCATGCTAAGATTTCATGTGGCTGTGTTCATGTGTACAAAATAT
TCTGGTATTCATGGAAAATTCCAAGAATGTGAAATTTCAGGATATTCAAT
GTCATGGTTAGACTGTCAAGCAGAGACACACCCAGCATCACCGGGGAAGA
GGGAATCTCAATTGAAGAATTACCTAGATCAATCAGATTGGCCTATGACC
AGGTGGCGAGGCATTTTTTTTAAGTGCAAATGGATGTAGAAGGATCCATT
TCCTGTGGGCAGTGCCATCCCTGGACAGACAAACCTGGGCTATATAAGAA
AGGTAGCTGAGGAAGATAAAAAGAGGTCTTTCTCCTTGGCCAAAGAGGAC
GGTTTCAAAAAGCTGTTTCTTCCAGGTCCTAAGGCCCACAATCCAATAAC
CAGTAGCTCCTCCGGAATCTCTGCCTCAGTTCTTGTCTCCGGGTTCCTGC
CTC

TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTCACGCTGATTTCCATAGTGGCTCTA
CCGGTTTGCAGTTCCACCCTTTTACCTACCTACCCTCTGGCATTCTTGTT
TTCTTATTTTGTTTTGTTTTGTTTTTGTTTGTTTGTTTCTTTGAGACAGG
TTTCTATCTGTAGCCCTGGCACCACCACGCTTTGTTTTTGTCTTCTGTTG
TTGGTTATTTTTCCCATTCTGACTTTGGCATGATGAATTGTTTTTGTTTT
ATATGTCTCTAATTGCCAGGTACCATGAACATTTTTCTGAAATATTTCTT
AGCTGGTTTTTTTTTGGTGCCCAGGCGCGGGGAGAATATTCTATTTCTCA
TTATATACTTCCCCCCCCTTCACATTATAACGTCTTTTTTATTTCTTCAT
GTATTTTATTATTATTATTCCCATCTATGCTTAGTACCCAATTCAATCTT
TTTATTGTCTTCGTCTCTATTTTCCTCTATTCTTGCATTGTCTACATTAC
TCCTTTCATCTCGATTTTCTCTCCCTATTTGCTCCTTTTTTTCCCTTATT
ATTCTTATTTTTTCATCCTTTCTTGTCTATTCTTTACCCTTGTATCTTCC
TTCTCATCCTGTCTTTGTATTCTTTTTCCTCTTTTTTCTATTTCTTTCTT
GTTATCTTTTTTACTCCTCCCCATTCTCTCCTTCTCCTTTTAAATCTTAC
ACTCATCTTTATCTGATACATCCTTCTATTTCTTCTTCATTTATTTTG

Query= MSMg01no260_n14.b1 MSMg01no260_n14.b1 CHROMAT_FILE:
MSMg01no260_n14.b1 PHD_FILE: MSMg01no260_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:04 2005
         (608 letters)



>mm_chr9_27032680_27033691
          Length = 1012

 Score =  737 bits (381), Expect = 0.0
 Identities = 452/495 (91%), Gaps = 32/495 (6%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttagtctatcccgaagagatgaatgtatattccacacctatcctactcctccct 64
           |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gaattcttagtcaatcatgaagagatgaatgtatattccacacctatcctactcctccct 408

                                                                       
Query: 65  tgatatccccctgcccagctcccagga----ccccccggagcccacagtatcctagatga 120
           |||||||||||||||||||||||||||    |||||| ||||||||||||||||||||||
Sbjct: 407 tgatatccccctgcccagctcccaggaccccccccccagagcccacagtatcctagatga 348

                                                                       
Query: 121 ccatagcacacaggttaggagacacaatttcagccctacctgttgtctttgcagtagccc 180
           |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 347 ccatagcacacaggttaggagacacaatttcaaccctatctgttgtctttgcagtagccc 288

                                                                       
Query: 181 atggctctggatgcctccagccctgccatgttctgtctaggggctagtgacttgttttct 240
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 287 atggctctggatgcctccagccctgccaggttctgtctaggggctagtgacttgttttct 228

                                                                       
Query: 241 catccagaccacttttacactgtatccatgctaagatttcatgtggctgtgttcatgtgt 300
           |||||||||||||||||||                           ||||||||||||||
Sbjct: 227 catccagaccacttttaca---------------------------ctgtgttcatgtgt 195

                                                                       
Query: 301 acaaaatattctggtattcatggaaaattccaagaatgtgaaatttcaggatattcaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 194 acaaaatattctggtattcatggaaaattccaagaatgtgaaatttcaggatattcagtg 135

                                                                       
Query: 361 tcatggttagactgtcaagcagagacacacccagcatcaccggggaagagggaatctcaa 420
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 134 tcatggttagactgtcaagcagaggcacacccagcatcaccggggaagagggaatctcaa 75

                                                                       
Query: 421 ttgaagaattacctagatcaatcagattggcctatgaccaggtggcgaggcatttttttt 480
           ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| 
Sbjct: 74  ttgaagaattacctagatcaatcagattggcctatgaccaggtagagaggcattttttt- 16

                          
Query: 481 aagtgcaaatggatg 495
           |||||||||||||||
Sbjct: 15  aagtgcaaatggatg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1012
Length adjustment: 10
Effective length of query: 598
Effective length of database: 1002
Effective search space:   599196
Effective search space used:   599196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)