XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGTT
CAGTCTCTGAGCCCCATTTTTTAATGAGGTTATTTGATTTTCTGAAGTCC
ACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATTT
AGGATAGATAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTAT
TGACGGTGTCTTTTGCCTTGCAGAAACGTTGGAGTTTCATTAGGTCCTAT
TTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAA
TTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTA
TAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGAT
TTGACCTTACACAAGAAGATAAGTATGGATCGATTCGCATTCTTCTACAT
GATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTT
CCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGT
GTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTG
TCTCTATACCAGTAACATGCAGTTTTTATCACCATTGCTTTGTTGTAAAG
CTTTAGGTCAGGTATGGTGATTCCACCAGAGGCTCTTTTATCCTTGAGAA
GACCTCTTGCATCCCACGTTTTCTGTAATTCCCGATGCAATTTGCAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGGGATAAATCTGCAATGTGAGTGCAATAATCAG
ACTTCCTTCTGCATCAGTAGCAGCTTTGGTTGTTAAGTTTCAAAAGTTTG
GCATTGTCATTCAGCAGCAAGGAGCTGTCTGCTGCTGTCACAGTCCCCGA
GCTGCTGATGGATGCTCATTTTCAACTGATATGAACGGGAGAGCAGAATA
TTTATATGAAGGGTGTGCCTCATTTGTTCCCAATGCCTTTCCCTTTCCTG
TTCATACTTTTATTATCTCTTGACAGAAAATGGTTTATCATGGATATTGT
TACCCATGATGTTTGAGAGTTTTTTTCTTCATATGTAATCCTGAGATTGA
CATATTTCTCTAAATTCAAACTCAAACCTGCAAAGAATGTGTAAATGGGA
AGGAAGGGCTCCTGGTCTAAATGGAATTTTGAAATGAAACACTAACCACA
AACTTTAAGTCATTTTGACTCAATTTTAAAGCTGAAAATATTTCTACCAA
TCTAATCTCTATATTCTGCTTGTATTGTTATTGAAATTTTTATAAATGTT
TCTTCATTCAAGATGAGCAAAATTTCTTCTTAAACTTACTGAAGCAACAC
ACAATTGATTTCTTTTGCCATCTAACTCCTTTTACTGCTCACAATCTTGT
ATTTGCATATAAAAGTGACAGCCTTCACAATGGTTGTGAATTGTTCAACA
TTTAACCTN

Query= MSMg01no262_i24.g1 MSMg01no262_i24.g1 CHROMAT_FILE:
MSMg01no262_i24.g1 PHD_FILE: MSMg01no262_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:15 2005
         (669 letters)



>mm_chr9_49804496_49805564
          Length = 1069

 Score = 1286 bits (665), Expect = 0.0
 Identities = 668/669 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agggataaatctgcaatgtgagtgcaataatcagacttccttctgcatcagtagcagctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 agggataaatctgcaatgtgagtgcaataatcagacttccttctgcatcagtagcagctt 810

                                                                       
Query: 61  tggttgttaagtttcaaaagtttggcattgtcattcagcagcaaggagctgtctgctgct 120
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tggttgttaagtttcaaatgtttggcattgtcattcagcagcaaggagctgtctgctgct 750

                                                                       
Query: 121 gtcacagtccccgagctgctgatggatgctcattttcaactgatatgaacgggagagcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gtcacagtccccgagctgctgatggatgctcattttcaactgatatgaacgggagagcag 690

                                                                       
Query: 181 aatatttatatgaagggtgtgcctcatttgttcccaatgcctttccctttcctgttcata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aatatttatatgaagggtgtgcctcatttgttcccaatgcctttccctttcctgttcata 630

                                                                       
Query: 241 cttttattatctcttgacagaaaatggtttatcatggatattgttacccatgatgtttga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cttttattatctcttgacagaaaatggtttatcatggatattgttacccatgatgtttga 570

                                                                       
Query: 301 gagtttttttcttcatatgtaatcctgagattgacatatttctctaaattcaaactcaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gagtttttttcttcatatgtaatcctgagattgacatatttctctaaattcaaactcaaa 510

                                                                       
Query: 361 cctgcaaagaatgtgtaaatgggaaggaagggctcctggtctaaatggaattttgaaatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cctgcaaagaatgtgtaaatgggaaggaagggctcctggtctaaatggaattttgaaatg 450

                                                                       
Query: 421 aaacactaaccacaaactttaagtcattttgactcaattttaaagctgaaaatatttcta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aaacactaaccacaaactttaagtcattttgactcaattttaaagctgaaaatatttcta 390

                                                                       
Query: 481 ccaatctaatctctatattctgcttgtattgttattgaaatttttataaatgtttcttca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ccaatctaatctctatattctgcttgtattgttattgaaatttttataaatgtttcttca 330

                                                                       
Query: 541 ttcaagatgagcaaaatttcttcttaaacttactgaagcaacacacaattgatttctttt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttcaagatgagcaaaatttcttcttaaacttactgaagcaacacacaattgatttctttt 270

                                                                       
Query: 601 gccatctaactccttttactgctcacaatcttgtatttgcatataaaagtgacagccttc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gccatctaactccttttactgctcacaatcttgtatttgcatataaaagtgacagccttc 210

                    
Query: 661 acaatggtt 669
           |||||||||
Sbjct: 209 acaatggtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space:   697881
Effective search space used:   697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)