Query= MSMg01no262_p06.b1 MSMg01no262_p06.b1 CHROMAT_FILE:
MSMg01no262_p06.b1 PHD_FILE: MSMg01no262_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:44 2005
(328 letters)
>mm_chr9_56366975_56367702
Length = 728
Score = 563 bits (291), Expect = e-165
Identities = 317/329 (96%), Gaps = 8/329 (2%)
Strand = Plus / Minus
Query: 4 gaattccagcccagtcaccc----ttacatagtgagttccctagtcccccaaaaggaaaa 59
||||||||||||| | || ||||||||||||||||||||||||||||||||||||
Sbjct: 548 gaattccagccca-t---ccagggttacatagtgagttccctagtcccccaaaaggaaaa 493
Query: 60 taaaatatcaaatttgaatagaaagtttggtagagggccttggaggaagtcttgaagcac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 taaaatatcaaatttgaatagaaagtttggtagagggccttggaggaagtcttgaagcac 433
Query: 120 aagctctcttaggcgactcaggcgcatccccttctgcattctcgcctggagaaacccttg 179
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 432 aagctctcttaggctactcaggcgcacccccttctgcattctcgcctggagaaacccttg 373
Query: 180 gcttgcctgtctagactttatggtgcagggctgtggagtcccctccctgcagagtttgga 239
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 372 gcttgcctgtctagactttatggcgcagggctgtggagtcccctccctgcagagtttgga 313
Query: 240 attctgttcattttctgctttccttgagctcttaaagtatgtgaaatgtcttcgttatgc 299
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 312 attctgttcattttctgctttccttgagctcttaaagtaggtgaaatgtcttcgttatgc 253
Query: 300 ttgtctctggtagaaacggagctcaacaa 328
|||||||||||||||||||||||||||||
Sbjct: 252 ttgtctctggtagaaacggagctcaacaa 224
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_p06.g1 MSMg01no262_p06.g1 CHROMAT_FILE:
MSMg01no262_p06.g1 PHD_FILE: MSMg01no262_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:44 2005
(338 letters)
>mm_chr9_56212282_56213019
Length = 738
Score = 638 bits (330), Expect = 0.0
Identities = 336/338 (99%)
Strand = Plus / Plus
Query: 1 caatgttaagcaaatatccaaacacagtaactggattagaatctatgcttagggaaggaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 caatgttaagcaaatatccaaacacagtaactggattagaatctatgcttaggggaggaa 260
Query: 61 agcaaagataagggaatgagtgagaaaagggatgacaaaagaagcttaggcaccagcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcaaagataagggaatgagtgagaaaagggatgacaaaagaagcttaggcaccagcagt 320
Query: 121 acatggcaacctaaagcccgaggtaccccaaagtcccaggtacccctaaaatctaagaaa 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 acatggcaacctaaagcccgaggtaccccaaagtcccagctacccctaaaatctaagaaa 380
Query: 181 caaaaagtagaagtccacttaaactaaactaagacaagataatagagtcataaaatcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaaaagtagaagtccacttaaactaaactaagacaagataatagagtcataaaatcagc 440
Query: 241 aagaaaatttaatactatatttattttgaaagggatcaaaatgaggtaacactaaatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaaaatttaatactatatttattttgaaagggatcaaaatgaggtaacactaaatgaa 500
Query: 301 gaaatgtcactgaaagacaagtaaaaagagttagtgaa 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaatgtcactgaaagacaagtaaaaagagttagtgaa 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
