Query= MSMg01no263_e24.b1 MSMg01no263_e24.b1 CHROMAT_FILE:
MSMg01no263_e24.b1 PHD_FILE: MSMg01no263_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:11 2005
(646 letters)
>mm_chr9_25128358_25129401
Length = 1044
Score = 1108 bits (573), Expect = 0.0
Identities = 620/641 (96%), Gaps = 10/641 (1%)
Strand = Plus / Plus
Query: 6 aattcttgtaccactctcctgcactgaagagagatctcaactgtttgtgaagaggatacg 65
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 206 aattcttgtaccactctcctgcactgaagagaga--tcaactgtttgtgaagaggatacg 263
Query: 66 gcccacggatgaatgtgaatccctaaataaagaagcaaggttggagtgagaaggcaccag 125
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcccacagatgaatgtgaatccctaaataaagaagcaaggttggagtgagaaggcaccag 323
Query: 126 ctgggaccaggcagtggtggatcctaagatgattagctagggaacgtctctgggagatac 185
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 324 ctgggaccaggcagtggtggatcctaagatgattagctagggaaggtctctgggagatac 383
Query: 186 cctggaggtatcagaaatgatgggcagtaacctccaagggtttccagtattacagacccc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctggaggtatcagaaatgatgggcagtaacctccaagggtttccagtattacagacccc 443
Query: 246 aggaagttgttgggtctagagatcttcccatagctgtgtgcctgtagctttgttttgtga 305
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aggaggttgttgggtctagagatcttcccatagctgtgtgcctgtagctttgttttgtga 503
Query: 306 gcctagcatctggatggatgttcacagtccttttagcacaggaagcctctgtttggcagg 365
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 504 gcctagcatctggatggatgttcacagtccttttagcacacgaagcctctgtttggcagg 563
Query: 366 atttgctcgctgccttctctcagggttgacataaaaaggaaatcagttgttctccttgga 425
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atttgctcgcggctttctctcagggttgacataaaaaggaaatcagttgttctccttgga 623
Query: 426 gcactgaatcctacactgcccacaggagaattctatctatagcccaaacctaacctggca 485
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 624 gcactgaatcctacactgcccacaggagaattctatctacagcccaaacctaacctggca 683
Query: 486 ttgtgagttttagagaaccagagctgagggctaagccacaccccactggtctggccagtg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttgtgagttttagagaaccagagctgagggctaagccacaccccactggtctggccagtg 743
Query: 546 ctagacagggacgcatgagcaggggggcagggggtctattggattgtccttgttgaaaga 605
|||||| ||||| | ||||||||||| ||||||||||||||||||||||||||
Sbjct: 744 ctagacggggacacgtgagcaggggg--------tctattggattgtccttgttgaaaga 795
Query: 606 atatggcatagctttggttctggccatcaatgctggtgatg 646
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 796 atatggcatagcttcggttctggccatcaatgctggtgatg 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1044
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1034
Effective search space: 657624
Effective search space used: 657624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_e24.g1 MSMg01no263_e24.g1 CHROMAT_FILE:
MSMg01no263_e24.g1 PHD_FILE: MSMg01no263_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:12 2005
(297 letters)
>mm_chr9_25220916_25221612
Length = 697
Score = 555 bits (287), Expect = e-162
Identities = 293/295 (99%)
Strand = Plus / Minus
Query: 1 atatggttagacaaaaggaagagttttgtggagtcgatgctacacacatgtctttattct 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 389 atatggttagacaaaaggaagagttttgtggagtagatgctacacacatgtctttattct 330
Query: 61 ttaagaatacctcttattagacttagaaatattgaagcagccttcatctggcaatgataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttaagaatacctcttattagacttagaaatattgaagcagccttcatctggcaatgataa 270
Query: 121 gcatttgagagtctcagagctaacagtgagatctacctagtgctaaagcccctacactat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gcatttgagagtctcagagctaacagtgagatctacctagtgctaaagcccctacactat 210
Query: 181 tctcctatttagcttcagctgtcaacttgacacaaatgagttttaagagggagtctcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tctcctatttagcttcagctgtcaacttgacacaaatgagttttaagagggagtctcaac 150
Query: 241 tgaggaatgccttggttagactggcctgttggcaagtctgtgggtacattttctt 295
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 149 tgaggaatgccttggttagactggcctgttggcaagtctgcgggtacattttctt 95
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
